RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 ELOVL2Q9NXB9 296 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 CALCOCO1Q9P1Z2 691 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 THAP10Q9P2Z0 257 aaPredicted RBP15.67■□□□□ 0.1
USP39-217ENST00000491659 DAAM1Q9Y4D1 1078 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 RAD54BQ9Y620 910 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 STON1Q9Y6Q2 735 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 GOLGA6L7A0A1B0GV03 622 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 MAP3K13O43283 966 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 TIMM44O43615 452 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 DAB1O75553 588 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 ERBB2P04626 1255 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 CDK11BP21127 795 aaKnown RBP15.66■□□□□ 0.1
USP39-217ENST00000491659 HLA-FP30511 346 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 COPB1P53618 953 aaKnown RBP15.66■□□□□ 0.1
USP39-217ENST00000491659 CREB5Q02930 508 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 TYRO3Q06418 890 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 TAF5Q15542 800 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 CCDC6Q16204 474 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 PTPN20Q4JDL3 420 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 AASDHQ4L235 1098 aaPredicted RBP15.66■□□□□ 0.1
USP39-217ENST00000491659 TAF3Q5VWG9 929 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 NADSYN1Q6IA69 706 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 KIAA1211LQ6NV74 962 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 OLFML1Q6UWY5 402 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 CHST9Q7L1S5 443 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 LPCAT2Q7L5N7 544 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 CHSY1Q86X52 802 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 ZDHHC17Q8IUH5 632 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 MFN1Q8IWA4 741 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 DEFB106AQ8N104 65 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.66■□□□□ 0.1
USP39-217ENST00000491659 MSANTD4Q8NCY6 345 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 NETO1Q8TDF5 533 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 ERLEC1Q96DZ1 483 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 PCMTD1Q96MG8 357 aaPredicted RBP15.66■□□□□ 0.1
USP39-217ENST00000491659 PRICKLE1Q96MT3 831 aaPredicted RBP15.66■□□□□ 0.1
USP39-217ENST00000491659 SLC2A13Q96QE2 648 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 NAT10Q9H0A0 1025 aaKnown RBP15.66■□□□□ 0.1
USP39-217ENST00000491659 GANQ9H2C0 597 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 FAM207AQ9NSI2 230 aaPredicted RBP15.66■□□□□ 0.1
USP39-217ENST00000491659 ABCB8Q9NUT2 735 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 GGA2Q9UJY4 613 aa15.66■□□□□ 0.1
USP39-217ENST00000491659 SYNJ2BP-COX16A0A087WUM0 186 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 SYNCRIPO60506 623 aaKnown RBP15.65■□□□□ 0.1
USP39-217ENST00000491659 ZNF217O75362 1048 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 GRAP2O75791 330 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 IGLV3-25P01717 112 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 ZNF806P0C7X5 589 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 SLC2A3P11169 496 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 PABPC1P11940 636 aaKnown RBP15.65■□□□□ 0.1
USP39-217ENST00000491659 NDUFV2P19404 249 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 CDH5P33151 784 aaPredicted RBP15.65■□□□□ 0.1
USP39-217ENST00000491659 IL12RB1P42701 662 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 DHPSP49366 369 aaPredicted RBP15.65■□□□□ 0.1
USP39-217ENST00000491659 KLK7P49862 253 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 POLR2FP61218 127 aaKnown RBP15.65■□□□□ 0.1
USP39-217ENST00000491659 SLC6A3Q01959 620 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 ZNF234Q14588 700 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 MAP7D1Q3KQU3 841 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 ZC3H12AQ5D1E8 599 aaKnown RBP15.65■□□□□ 0.1
USP39-217ENST00000491659 MS4A13Q5J8X5 152 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 SERPINA13PQ6UXR4 307 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 SLC26A9Q7LBE3 791 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 CYP2U1Q7Z449 544 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 ATP6V0D2Q8N8Y2 350 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 BTN2A3PQ96KV6 586 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 SPAG5Q96R06 1193 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 NUCKS1Q9H1E3 243 aaKnown RBP15.65■□□□□ 0.1
USP39-217ENST00000491659 VPS45Q9NRW7 570 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.65■□□□□ 0.1
USP39-217ENST00000491659 DDIT4Q9NX09 232 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 DLL3Q9NYJ7 618 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 COX16Q9P0S2 106 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 TMEM63CQ9P1W3 806 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 STIM2Q9P246 746 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 LIMA1Q9UHB6 759 aaKnown RBP15.65■□□□□ 0.1
USP39-217ENST00000491659 SLC12A6Q9UHW9 1150 aa15.65■□□□□ 0.1
USP39-217ENST00000491659 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.64■□□□□ 0.09
USP39-217ENST00000491659 BCLAF3A2AJT9 711 aaKnown RBP15.64■□□□□ 0.09
USP39-217ENST00000491659 LGALS16A8MUM7 142 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 WASH3PC4AMC7 463 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 LSM8O95777 96 aaKnown RBP15.64■□□□□ 0.09
USP39-217ENST00000491659 ABCB4P21439 1286 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 CCR1P32246 355 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 PITX1P78337 314 aaPredicted RBP15.64■□□□□ 0.09
USP39-217ENST00000491659 CDH18Q13634 790 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 ENPP2Q13822 863 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 FNDC3BQ53EP0 1204 aaKnown RBP15.64■□□□□ 0.09
USP39-217ENST00000491659 PLA2G2CQ5R387 149 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 RAP1GAP2Q684P5 730 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 TMEM215Q68D42 235 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 RNF43Q68DV7 783 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 KIAA1324Q6UXG2 1013 aaKnown RBP15.64■□□□□ 0.09
USP39-217ENST00000491659 SLC36A4Q6YBV0 504 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 ERMP1Q7Z2K6 904 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 DGLUCYQ7Z3D6 616 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 NOP9Q86U38 636 aaKnown RBP15.64■□□□□ 0.09
USP39-217ENST00000491659 ERICH1Q86X53 443 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 CARNMT1Q8N4J0 409 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 AOPEPQ8N6M6 819 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms