RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ARID3AQ99856 593 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 ZSCAN16Q9H4T2 348 aaPredicted RBP13.83□□□□□ -0.2
USF1-206ENST00000491629 SERGEFQ9UGK8 458 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 A0A1B0GTQ1 180 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 EIF4E1BA6NMX2 242 aaKnown RBP13.82□□□□□ -0.2
USF1-206ENST00000491629 WNT9AO14904 365 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 IKBKBO14920 756 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 TIMM44O43615 452 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 KIF20AO95235 890 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 NR3C1P04150 777 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 TRIM49P0CI25 452 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 TRIM49CP0CI26 452 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 EIF2S3P41091 472 aaKnown RBP13.82□□□□□ -0.2
USF1-206ENST00000491629 TEAD4Q15561 434 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 FNDC3BQ53EP0 1204 aaKnown RBP13.82□□□□□ -0.2
USF1-206ENST00000491629 ZNF394Q53GI3 561 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 PCSK4Q6UW60 755 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 CHST9Q7L1S5 443 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 TADA2BQ86TJ2 420 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 PIGZQ86VD9 579 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.82□□□□□ -0.2
USF1-206ENST00000491629 SLC4A11Q8NBS3 891 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 GOLGA5Q8TBA6 731 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 SLC39A7Q92504 469 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 CDK5RAP1Q96SZ6 601 aaKnown RBP13.82□□□□□ -0.2
USF1-206ENST00000491629 BTBD1Q9H0C5 482 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 MAGEF1Q9HAY2 307 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 CYP3A43Q9HB55 503 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 ABCB8Q9NUT2 735 aa13.82□□□□□ -0.2
USF1-206ENST00000491629 CYSRT1A8MQ03 144 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 E9PAM4 449 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 PDXKO00764 312 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 ATXN7O15265 892 aaPredicted RBP13.81□□□□□ -0.2
USF1-206ENST00000491629 CYBBP04839 570 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 GCLMP48507 274 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 YWHAGP61981 247 aaKnown RBP eCLIP13.81□□□□□ -0.2
USF1-206ENST00000491629 KCNJ12Q14500 433 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 PM20D1Q6GTS8 502 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 TMPRSS12Q86WS5 348 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 FMNL3Q8IVF7 1028 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 SEMA4DQ92854 862 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 PLD4Q96BZ4 506 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 LMLNQ96KR4 655 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 SLC6A18Q96N87 628 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 NIF3L1Q9GZT8 377 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 FTSJ1Q9UET6 329 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 STOML2Q9UJZ1 356 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 PIEZO2Q9H5I5 2752 aa13.81□□□□□ -0.2
USF1-206ENST00000491629 ACTN4O43707 911 aaKnown RBP13.8□□□□□ -0.2
USF1-206ENST00000491629 YEATS4O95619 227 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 CD70P32970 193 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 RAD23BP54727 409 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 PDE4CQ08493 712 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 C19orf57Q0VDD7 668 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 KMT5BQ4FZB7 885 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 MPPE1Q53F39 396 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 RESP18Q5W5W9 173 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 CEP135Q66GS9 1140 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 MBLAC2Q68D91 279 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 SAP25Q8TEE9 199 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 ULBP1Q9BZM6 244 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 UBXN6Q9BZV1 441 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 SFMBT1Q9UHJ3 866 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 SERTAD1Q9UHV2 236 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 GGA2Q9UJY4 613 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 PCDHA7Q9UN72 937 aa13.8□□□□□ -0.2
USF1-206ENST00000491629 COL27A1Q8IZC6 1860 aaPredicted RBP13.8□□□□□ -0.2
USF1-206ENST00000491629 HECTD1Q9ULT8 2610 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 A0A1W2PPC4 97 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 A0A1W2PR77 199 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 TK2O00142 265 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 ENC1O14682 589 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 VILLO15195 856 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 DLDP09622 509 aaKnown RBP13.79□□□□□ -0.2
USF1-206ENST00000491629 PABPC1P11940 636 aaKnown RBP13.79□□□□□ -0.2
USF1-206ENST00000491629 PLA2G2AP14555 144 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 ACADVLP49748 655 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 VAMP7P51809 220 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 TKTL1P51854 596 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 BCAT1P54687 386 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 RACK1P63244 317 aaKnown RBP13.79□□□□□ -0.2
USF1-206ENST00000491629 SEMG2Q02383 582 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 ARID5AQ03989 594 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 ZBTB16Q05516 673 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 TARDBPQ13148 414 aaKnown RBP eCLIP13.79□□□□□ -0.2
USF1-206ENST00000491629 KIAA0895LQ68EN5 471 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 FBXL19Q6PCT2 694 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 RSRC2Q7L4I2 434 aaKnown RBP13.79□□□□□ -0.2
USF1-206ENST00000491629 WFIKKN2Q8TEU8 576 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 TSC1Q92574 1164 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 MYEOVQ96EZ4 313 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 INTS4Q96HW7 963 aaKnown RBP13.79□□□□□ -0.2
USF1-206ENST00000491629 HEXIM2Q96MH2 286 aaKnown RBP13.79□□□□□ -0.2
USF1-206ENST00000491629 ELF4Q99607 663 aaPredicted RBP13.79□□□□□ -0.2
USF1-206ENST00000491629 RSPH9Q9H1X1 276 aaPredicted RBP13.79□□□□□ -0.2
USF1-206ENST00000491629 SGK2Q9HBY8 427 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 INTS6Q9UL03 887 aaKnown RBP13.79□□□□□ -0.2
USF1-206ENST00000491629 STRIP2Q9ULQ0 834 aa13.79□□□□□ -0.2
USF1-206ENST00000491629 PLA2G4CQ9UP65 541 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms