RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 SART1O43290 800 aaKnown RBP18.71■□□□□ 0.59
HMGN1-219ENST00000491183 ADRB1P08588 477 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 ERCC5P28715 1186 aaPredicted RBP18.71■□□□□ 0.59
HMGN1-219ENST00000491183 ZNF33AQ06730 810 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 STARD3Q14849 445 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 TAF5Q15542 800 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 MAN2A1Q16706 1144 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 MIIPQ5JXC2 388 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 MPP7Q5T2T1 576 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 PEAR1Q5VY43 1037 aaPredicted RBP18.71■□□□□ 0.59
HMGN1-219ENST00000491183 CHST9Q7L1S5 443 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 METTL3Q86U44 580 aaKnown RBP18.71■□□□□ 0.59
HMGN1-219ENST00000491183 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.71■□□□□ 0.59
HMGN1-219ENST00000491183 SERPINB11Q96P15 392 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 IRX2Q9BZI1 471 aaPredicted RBP18.71■□□□□ 0.59
HMGN1-219ENST00000491183 NUP62CLQ9H1M0 184 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 PRDM16Q9HAZ2 1276 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 ITM2CQ9NQX7 267 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 LMBRD1Q9NUN5 540 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 DNAJC12Q9UKB3 198 aa18.71■□□□□ 0.59
HMGN1-219ENST00000491183 FOXN3O00409 490 aaPredicted RBP18.7■□□□□ 0.58
HMGN1-219ENST00000491183 TBL1XO60907 577 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 CD70P32970 193 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 COPAP53621 1224 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 PITX1P78337 314 aaPredicted RBP18.7■□□□□ 0.58
HMGN1-219ENST00000491183 KCNMA1Q12791 1236 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 PDCLQ13371 301 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 NNTQ13423 1086 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 VWA3BQ502W6 1294 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 HSP90AA4PQ58FG1 418 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 TRIM61Q5EBN2 209 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 TAC4Q86UU9 113 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 TMPRSS6Q8IU80 811 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 WFIKKN2Q8TEU8 576 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 CYB5D2Q8WUJ1 264 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 LMLNQ96KR4 655 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 PRICKLE1Q96MT3 831 aaPredicted RBP18.7■□□□□ 0.58
HMGN1-219ENST00000491183 NDST4Q9H3R1 872 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 STIM2Q9P246 746 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 USP36Q9P275 1121 aaKnown RBP18.7■□□□□ 0.58
HMGN1-219ENST00000491183 XPO7Q9UIA9 1087 aaKnown RBP18.7■□□□□ 0.58
HMGN1-219ENST00000491183 GGA2Q9UJY4 613 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 PCDHGC3Q9UN70 934 aa18.7■□□□□ 0.58
HMGN1-219ENST00000491183 MUC22E2RYF6 1773 aaPredicted RBP18.69■□□□□ 0.58
HMGN1-219ENST00000491183 KCNJ18B7U540 433 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 CAPN9O14815 690 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 IRAK2O43187 625 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 SYNCRIPO60506 623 aaKnown RBP18.69■□□□□ 0.58
HMGN1-219ENST00000491183 IGLV3-25P01717 112 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 EPHX1P07099 455 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 PNMA6AP0CW24 399 aaPredicted RBP18.69■□□□□ 0.58
HMGN1-219ENST00000491183 PABPC1P11940 636 aaKnown RBP18.69■□□□□ 0.58
HMGN1-219ENST00000491183 HLA-EP13747 358 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 CLCN1P35523 988 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 YWHAZP63104 245 aaKnown RBP18.69■□□□□ 0.58
HMGN1-219ENST00000491183 EIF4EBP2Q13542 120 aaPredicted RBP18.69■□□□□ 0.58
HMGN1-219ENST00000491183 E2F5Q15329 346 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 PTPRNQ16849 979 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 MBLAC2Q68D91 279 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 SLC23A3Q6PIS1 610 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 SERPINA13PQ6UXR4 307 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 PASD1Q8IV76 773 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 FAM114A1Q8IWE2 563 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 ZNF419Q96HQ0 510 aaPredicted RBP18.69■□□□□ 0.58
HMGN1-219ENST00000491183 CPXM1Q96SM3 734 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 TUBGCP2Q9BSJ2 902 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 NUCKS1Q9H1E3 243 aaKnown RBP18.69■□□□□ 0.58
HMGN1-219ENST00000491183 TMEM245Q9H330 911 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 POPDC2Q9HBU9 364 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 TMEM9BQ9NQ34 198 aa18.69■□□□□ 0.58
HMGN1-219ENST00000491183 SAMSN1Q9NSI8 373 aaKnown RBP18.69■□□□□ 0.58
HMGN1-219ENST00000491183 ADAMTS9Q9P2N4 1935 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 CNOT1A5YKK6 2376 aaKnown RBP18.68■□□□□ 0.58
HMGN1-219ENST00000491183 KCNK5O95279 499 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 PRKCSHP14314 528 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-219ENST00000491183 KCNA4P22459 653 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 DPP6P42658 865 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 RPS24P62847 133 aaKnown RBP18.68■□□□□ 0.58
HMGN1-219ENST00000491183 ARID5AQ03989 594 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 PTK2Q05397 1052 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 ZC3H12AQ5D1E8 599 aaKnown RBP18.68■□□□□ 0.58
HMGN1-219ENST00000491183 MS4A13Q5J8X5 152 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 N4BP2L1Q5TBK1 243 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-219ENST00000491183 SMYD5Q6GMV2 418 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 AHI1Q8N157 1196 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 CFAP52Q8N1V2 620 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 FIBINQ8TAL6 211 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 SIPA1Q96FS4 1042 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 PPP1R13BQ96KQ4 1090 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 HSPA12BQ96MM6 686 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 TRIM62Q9BVG3 475 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 NUSAP1Q9BXS6 441 aaKnown RBP18.68■□□□□ 0.58
HMGN1-219ENST00000491183 LHX5Q9H2C1 402 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 FSCN3Q9NQT6 498 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 WSB2Q9NYS7 404 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-219ENST00000491183 PLA2G4CQ9UP65 541 aa18.68■□□□□ 0.58
HMGN1-219ENST00000491183 NDUFS2O75306 463 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 TRUB2O95900 331 aaKnown RBP18.67■□□□□ 0.58
HMGN1-219ENST00000491183 MOCS2O96007 188 aaPredicted RBP18.67■□□□□ 0.58
HMGN1-219ENST00000491183 ENGP17813 658 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms