RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 FLRT1Q9NZU1 646 aa5.53□□□□□ -1.52
HMGB1P38-201ENST00000490557 PI4KBQ9UBF8 816 aa5.53□□□□□ -1.52
HMGB1P38-201ENST00000490557 BAG5Q9UL15 447 aa5.53□□□□□ -1.52
HMGB1P38-201ENST00000490557 RAB21Q9UL25 225 aa5.53□□□□□ -1.52
HMGB1P38-201ENST00000490557 TRPC5Q9UL62 973 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P38-201ENST00000490557 C19orf53Q9UNZ5 99 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P38-201ENST00000490557 ZBTB1Q9Y2K1 713 aa5.53□□□□□ -1.52
HMGB1P38-201ENST00000490557 MORC2Q9Y6X9 1032 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P38-201ENST00000490557 C3orf70A6NLC5 250 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 M0QYT0 321 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 HOXD12P35452 270 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 RBM6P78332 1123 aaKnown RBP5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 TLE3Q04726 772 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 EZH2Q15910 746 aaKnown RBP5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 CEP78Q5JTW2 689 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 ERAP2Q6P179 960 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 GALNT15Q8N3T1 639 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 GALNT16Q8N428 558 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 ANKRD42Q8N9B4 389 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 OR1N1Q8NGS0 311 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 SCAMP5Q8TAC9 235 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 CUL5Q93034 780 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 SH2D3AQ9BRG2 576 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 HERPUD2Q9BSE4 406 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 FAM167BQ9BTA0 163 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 TAF1DQ9H5J8 278 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 MLXIPQ9HAP2 919 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 SEPSECSQ9HD40 501 aaKnown RBP5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 SAYSD1Q9NPB0 183 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 PDGFCQ9NRA1 345 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 NDUFAF4Q9P032 175 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 DAPP1Q9UN19 280 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 SLC12A4Q9UP95 1085 aa5.52□□□□□ -1.53
HMGB1P38-201ENST00000490557 LOC105369274A0A096LPK9 316 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 LOC102723532A0A0G2JNH3 316 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 PRYO14603 147 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 INPPL1O15357 1258 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 EIF3JO75822 258 aaKnown RBP5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 CD63P08962 238 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 SERPINA4P29622 427 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 STAT6P42226 847 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 ARHGAP25P42331 645 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 TAS2R50P59544 299 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 GHRHRQ02643 423 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 MTA1Q13330 715 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 GAB1Q13480 694 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 ZRSR2Q15696 482 aaKnown RBP5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 ANXA2RQ3ZCQ2 193 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 TRIM60Q495X7 471 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 ANKRD45Q5TZF3 282 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 RRAGAQ7L523 313 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 YTHDF3Q7Z739 585 aaKnown RBP5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 LAS2Q8IYD9 372 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 OR4N4Q8N0Y3 316 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 OTUD7AQ8TE49 926 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 ASB12Q8WXK4 309 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 GOLGA1Q92805 767 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 KAT2BQ92831 832 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 CELF1Q92879 486 aaKnown RBP5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 ZNF845Q96IR2 970 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 ABHD14AQ9BUJ0 271 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 MECRQ9BV79 373 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 VPS16Q9H269 839 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 SEMA5BQ9P283 1151 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 KLHL13Q9P2N7 655 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 RIPOR2Q9Y4F9 1068 aa5.51□□□□□ -1.53
HMGB1P38-201ENST00000490557 FAM90A18PA6NE21 464 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 FAM90A16PA6NEW6 464 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 FAM90A9PA6NNJ1 464 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 SLC38A8A6NNN8 435 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 FAM90A5PA8MXJ8 464 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 IRAK2O43187 625 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 ENO1P06733 434 aaKnown RBP5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 FAM90A15PP0C7V4 464 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 FAM90A14PP0C7W9 464 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 HALP42357 657 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 PCP4P48539 62 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 C21orf58P58505 322 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 RPL15P61313 204 aaKnown RBP5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 TANGO2Q6ICL3 276 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 SLC18B1Q6NT16 456 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 TMEM88Q6PEY1 159 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 DHRS13Q6UX07 377 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 SLC39A5Q6ZMH5 540 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 STT3BQ8TCJ2 826 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 MAP4K1Q92918 833 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 SCLT1Q96NL6 688 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 GPR78Q96P69 363 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 FCRL5Q96RD9 977 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 IPO11Q9UI26 975 aaKnown RBP5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 SLC8A2Q9UPR5 921 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 B3GNT3Q9Y2A9 372 aa5.5□□□□□ -1.53
HMGB1P38-201ENST00000490557 WIPF3A6NGB9 483 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 MBD3L5A6NJ08 208 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 IPO5O00410 1097 aaKnown RBP5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 LATS1O95835 1130 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 CELA2AP08217 269 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 PEPDP12955 493 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 AKR1A1P14550 325 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 KELP23276 732 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms