RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 PYGMP11217 842 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 KRT3P12035 628 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 CCDC130P13994 396 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 IFRD2Q12894 506 aaPredicted RBP16.3■□□□□ 0.2
PCCB-218ENST00000490504 RUNX3Q13761 415 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 GAS6Q14393 721 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 PON2Q15165 354 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 ZNF528Q3MIS6 628 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 C1orf228Q6PIY5 440 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 TTC30AQ86WT1 665 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 SH3RF2Q8TEC5 729 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 FNIP1Q8TF40 1166 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 CHFRQ96EP1 664 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 PRMT8Q9NR22 394 aaPredicted RBP16.3■□□□□ 0.2
PCCB-218ENST00000490504 ST7Q9NRC1 585 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 SNX16P57768 344 aa16.29■□□□□ 0.2
PCCB-218ENST00000490504 ZXDBP98169 803 aa16.29■□□□□ 0.2
PCCB-218ENST00000490504 ZNF252P-AS1Q0IIN9 211 aa16.29■□□□□ 0.2
PCCB-218ENST00000490504 USP4Q13107 963 aa16.29■□□□□ 0.2
PCCB-218ENST00000490504 AADACL2Q6P093 401 aa16.29■□□□□ 0.2
PCCB-218ENST00000490504 KLHL7Q8IXQ5 586 aa16.29■□□□□ 0.2
PCCB-218ENST00000490504 NUP93Q8N1F7 819 aa16.29■□□□□ 0.2
PCCB-218ENST00000490504 ANKRD52Q8NB46 1076 aa16.29■□□□□ 0.2
PCCB-218ENST00000490504 SLC2A14Q8TDB8 520 aa16.29■□□□□ 0.2
PCCB-218ENST00000490504 STK32AQ8WU08 396 aa16.29■□□□□ 0.2
PCCB-218ENST00000490504 RNF38Q9H0F5 515 aa16.29■□□□□ 0.2
PCCB-218ENST00000490504 METTL5Q9NRN9 209 aaKnown RBP16.29■□□□□ 0.2
PCCB-218ENST00000490504 DMGDHQ9UI17 866 aaKnown RBP16.29■□□□□ 0.2
PCCB-218ENST00000490504 ARHGAP26Q9UNA1 814 aa16.29■□□□□ 0.2
PCCB-218ENST00000490504 E5RJQ4 531 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 TNFRSF10BO14763 440 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 AP1G2O75843 785 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 BEST1O76090 585 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 YWHAQP27348 245 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 BCAT1P54687 386 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 TAS2R40P59535 323 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 SLC7A5Q01650 507 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 OGDHQ02218 1023 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 BST2Q10589 180 aaKnown RBP16.28■□□□□ 0.2
PCCB-218ENST00000490504 PDGFRLQ15198 375 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 MAP9Q49MG5 647 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 MAMSTRQ6ZN01 415 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 Q6ZS52 159 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 SLC13A5Q86YT5 568 aaPredicted RBP16.28■□□□□ 0.2
PCCB-218ENST00000490504 KATNAL2Q8IYT4 538 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 ZMIZ2Q8NF64 920 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 SCAMP5Q8TAC9 235 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 SLC35F5Q8WV83 523 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 OSCP1Q8WVF1 389 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 SMARCD1Q96GM5 515 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 SMOQ99835 787 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 SLC4A5Q9BY07 1137 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 LINC00597Q9H2U6 94 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 DMAP1Q9NPF5 467 aaPredicted RBP16.28■□□□□ 0.2
PCCB-218ENST00000490504 KRT82Q9NSB4 513 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 ZNF446Q9NWS9 450 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 DUS2Q9NX74 493 aaKnown RBP16.28■□□□□ 0.2
PCCB-218ENST00000490504 WNT6Q9Y6F9 365 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 TICRRQ7Z2Z1 1910 aa16.28■□□□□ 0.2
PCCB-218ENST00000490504 RAD51CO43502 376 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 ZRANB2O95218 330 aaKnown RBP eCLIP16.27■□□□□ 0.2
PCCB-218ENST00000490504 PSMA2P25787 234 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 TNFRSF8P28908 595 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 RFC1P35251 1148 aaPredicted RBP16.27■□□□□ 0.2
PCCB-218ENST00000490504 SSR1P43307 286 aaKnown RBP16.27■□□□□ 0.2
PCCB-218ENST00000490504 PPP3CCP48454 512 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 CCINQ13939 588 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 LRRC32Q14392 662 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 FAM102AQ5T9C2 384 aaPredicted RBP16.27■□□□□ 0.2
PCCB-218ENST00000490504 LRRC38Q5VT99 294 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 DAB2IPQ5VWQ8 1189 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 OR6B2Q6IFH4 312 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 PMF1Q6P1K2 205 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 ZC3H14Q6PJT7 736 aaKnown RBP16.27■□□□□ 0.2
PCCB-218ENST00000490504 FAM183BPQ6ZVS7 135 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 JOSD2Q8TAC2 188 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 NELL1Q92832 810 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 SLITRK1Q96PX8 696 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 DDX47Q9H0S4 455 aaKnown RBP16.27■□□□□ 0.2
PCCB-218ENST00000490504 SEMA4AQ9H3S1 761 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 CYLDQ9NQC7 956 aa16.27■□□□□ 0.2
PCCB-218ENST00000490504 RIF1Q5UIP0 2472 aaKnown RBP16.27■□□□□ 0.19
PCCB-218ENST00000490504 LEFTY2O00292 366 aa16.27■□□□□ 0.19
PCCB-218ENST00000490504 SART1O43290 800 aaKnown RBP16.27■□□□□ 0.19
PCCB-218ENST00000490504 SEC31AO94979 1220 aaKnown RBP16.27■□□□□ 0.19
PCCB-218ENST00000490504 HEXIM1O94992 359 aaKnown RBP16.27■□□□□ 0.19
PCCB-218ENST00000490504 RTN3O95197 1032 aaPredicted RBP16.27■□□□□ 0.19
PCCB-218ENST00000490504 LMNAP02545 664 aaKnown RBP16.27■□□□□ 0.19
PCCB-218ENST00000490504 TDGF1P13385 188 aa16.27■□□□□ 0.19
PCCB-218ENST00000490504 PFKLP17858 780 aa16.27■□□□□ 0.19
PCCB-218ENST00000490504 ADORA2BP29275 332 aa16.27■□□□□ 0.19
PCCB-218ENST00000490504 RGS7P49802 495 aa16.27■□□□□ 0.19
PCCB-218ENST00000490504 SLC5A3P53794 718 aa16.27■□□□□ 0.19
PCCB-218ENST00000490504 MRPS25P82663 173 aaKnown RBP16.27■□□□□ 0.19
PCCB-218ENST00000490504 SATB1Q01826 763 aa16.27■□□□□ 0.19
PCCB-218ENST00000490504 PDE4CQ08493 712 aa16.27■□□□□ 0.19
PCCB-218ENST00000490504 DGKKQ5KSL6 1271 aa16.27■□□□□ 0.19
PCCB-218ENST00000490504 NAIF1Q69YI7 327 aaPredicted RBP16.27■□□□□ 0.19
PCCB-218ENST00000490504 TMEM110Q86TL2 294 aa16.27■□□□□ 0.19
PCCB-218ENST00000490504 EXD1Q8NHP7 514 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms