RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 SYNCQ9H7C4 482 aa20.52■□□□□ 0.88
SMC4-222ENST00000490207 FANCLQ9NW38 375 aa20.52■□□□□ 0.88
SMC4-222ENST00000490207 ELOVL2Q9NXB9 296 aa20.52■□□□□ 0.88
SMC4-222ENST00000490207 TYW5A2RUC4 315 aaKnown RBP20.51■□□□□ 0.87
SMC4-222ENST00000490207 WASH3PC4AMC7 463 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 F8VZ95 297 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 HSF2BPO75031 334 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 IGLV3-25P01717 112 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 ERBB2P04626 1255 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 ZNF806P0C7X5 589 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 CYP11B1P15538 503 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 NDUFV2P19404 249 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 HLA-FP30511 346 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 SNX16P57768 344 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 ARID5AQ03989 594 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 SF3A2Q15428 464 aaKnown RBP20.51■□□□□ 0.87
SMC4-222ENST00000490207 TAF5Q15542 800 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 PTPN20Q4JDL3 420 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 DCAF6Q58WW2 860 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 EFHC1Q5JVL4 640 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 PLA2G2CQ5R387 149 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 FKBP15Q5T1M5 1219 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 DEFB106AQ8N104 65 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.51■□□□□ 0.87
SMC4-222ENST00000490207 C12orf50Q8NA57 414 aaPredicted RBP20.51■□□□□ 0.87
SMC4-222ENST00000490207 ANKRD20A12PQ8NF67 263 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 NETO1Q8TDF5 533 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 SLC2A13Q96QE2 648 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 GANQ9H2C0 597 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 FAM204AQ9H8W3 233 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 ABCB8Q9NUT2 735 aa20.51■□□□□ 0.87
SMC4-222ENST00000490207 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.5■□□□□ 0.87
SMC4-222ENST00000490207 PABPC1P11940 636 aaKnown RBP20.5■□□□□ 0.87
SMC4-222ENST00000490207 DHPSP49366 369 aaPredicted RBP20.5■□□□□ 0.87
SMC4-222ENST00000490207 KLK7P49862 253 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 PITX1P78337 314 aaPredicted RBP20.5■□□□□ 0.87
SMC4-222ENST00000490207 ZNF234Q14588 700 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 AASDHQ4L235 1098 aaPredicted RBP20.5■□□□□ 0.87
SMC4-222ENST00000490207 MPP7Q5T2T1 576 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 TAF3Q5VWG9 929 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 TMEM215Q68D42 235 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 RNF43Q68DV7 783 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 OLFML1Q6UWY5 402 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 CHST9Q7L1S5 443 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 CYP2U1Q7Z449 544 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 AHI1Q8N157 1196 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 FRMD1Q8N878 549 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 ZNF557Q8N988 423 aaPredicted RBP20.5■□□□□ 0.87
SMC4-222ENST00000490207 TMEM35BQ8NCS4 154 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 WFDC5Q8TCV5 224 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 SORCS1Q8WY21 1168 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 STK33Q9BYT3 514 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 NUCKS1Q9H1E3 243 aaKnown RBP20.5■□□□□ 0.87
SMC4-222ENST00000490207 SMOC1Q9H4F8 434 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 VPS45Q9NRW7 570 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 STIM2Q9P246 746 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 MBD1Q9UIS9 605 aaPredicted RBP20.5■□□□□ 0.87
SMC4-222ENST00000490207 GGA2Q9UJY4 613 aa20.5■□□□□ 0.87
SMC4-222ENST00000490207 BCLAF3A2AJT9 711 aaKnown RBP20.49■□□□□ 0.87
SMC4-222ENST00000490207 MAP3K13O43283 966 aa20.49■□□□□ 0.87
SMC4-222ENST00000490207 DAB1O75553 588 aa20.49■□□□□ 0.87
SMC4-222ENST00000490207 GRAP2O75791 330 aa20.49■□□□□ 0.87
SMC4-222ENST00000490207 CDH5P33151 784 aaPredicted RBP20.49■□□□□ 0.87
SMC4-222ENST00000490207 COPB1P53618 953 aaKnown RBP20.49■□□□□ 0.87
SMC4-222ENST00000490207 CDK17Q00537 523 aa20.49■□□□□ 0.87
SMC4-222ENST00000490207 ENPP2Q13822 863 aa20.49■□□□□ 0.87
SMC4-222ENST00000490207 ZC3H12AQ5D1E8 599 aaKnown RBP20.49■□□□□ 0.87
SMC4-222ENST00000490207 LPCAT2Q7L5N7 544 aa20.49■□□□□ 0.87
SMC4-222ENST00000490207 ERMP1Q7Z2K6 904 aa20.49■□□□□ 0.87
SMC4-222ENST00000490207 DGLUCYQ7Z3D6 616 aa20.49■□□□□ 0.87
SMC4-222ENST00000490207 CHSY1Q86X52 802 aa20.49■□□□□ 0.87
SMC4-222ENST00000490207 MFN1Q8IWA4 741 aa20.49■□□□□ 0.87
SMC4-222ENST00000490207 SLC6A17Q9H1V8 727 aa20.49■□□□□ 0.87
SMC4-222ENST00000490207 TMEM63CQ9P1W3 806 aa20.49■□□□□ 0.87
SMC4-222ENST00000490207 XPO7Q9UIA9 1087 aaKnown RBP20.49■□□□□ 0.87
SMC4-222ENST00000490207 SYNJ2BP-COX16A0A087WUM0 186 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 TIMM44O43615 452 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 GDF9O60383 454 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 CAVIN2O95810 425 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 PRKCHP24723 683 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 SLC6A3Q01959 620 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 TYRO3Q06418 890 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 FUT11Q495W5 492 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 MS4A13Q5J8X5 152 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 RAP1GAP2Q684P5 730 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 KIAA1324Q6UXG2 1013 aaKnown RBP20.48■□□□□ 0.87
SMC4-222ENST00000490207 SERPINA13PQ6UXR4 307 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 SLC26A9Q7LBE3 791 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 KIAA0907Q7Z7F0 614 aaPredicted RBP20.48■□□□□ 0.87
SMC4-222ENST00000490207 NOP9Q86U38 636 aaKnown RBP20.48■□□□□ 0.87
SMC4-222ENST00000490207 ZDHHC17Q8IUH5 632 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 ATP6V0D2Q8N8Y2 350 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 MYEOVQ96EZ4 313 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 BTN2A3PQ96KV6 586 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 MRGPRX1Q96LB2 322 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 RTKNQ9BST9 563 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 FAM207AQ9NSI2 230 aaPredicted RBP20.48■□□□□ 0.87
SMC4-222ENST00000490207 DDIT4Q9NX09 232 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 COX16Q9P0S2 106 aa20.48■□□□□ 0.87
SMC4-222ENST00000490207 LIMA1Q9UHB6 759 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms