RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 IGLV3-10A0A075B6K4 115 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 E2F8A0AVK6 867 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 LEFTY2O00292 366 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 ZRANB2O95218 330 aaKnown RBP eCLIP13.83□□□□□ -0.2
TRAIP-210ENST00000489948 KDELR1P24390 212 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 CORO1AP31146 461 aaKnown RBP13.83□□□□□ -0.2
TRAIP-210ENST00000489948 CDKN2BP42772 138 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 HCAR3P49019 387 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 KCNQ1P51787 676 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 CDH6P55285 790 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 DPYSL3Q14195 570 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 CBX2Q14781 532 aaPredicted RBP13.83□□□□□ -0.2
TRAIP-210ENST00000489948 CLUL1Q15846 466 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 CA9Q16790 459 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 C5orf22Q49AR2 442 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 ARTNQ5T4W7 220 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 SEL1L2Q5TEA6 688 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 PIK3R6Q5UE93 754 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 POTEHQ6S545 545 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 HTR3DQ70Z44 454 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 ZNF683Q8IZ20 524 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 RASGEF1CQ8N431 466 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 ZSCAN18Q8TBC5 510 aaPredicted RBP13.83□□□□□ -0.2
TRAIP-210ENST00000489948 ING5Q8WYH8 240 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 RAPGEF5Q92565 580 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 SMARCD2Q92925 531 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 ZSWIM3Q96MP5 696 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 KCTD15Q96SI1 283 aaPredicted RBP13.83□□□□□ -0.2
TRAIP-210ENST00000489948 EPAS1Q99814 870 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 PRMT1Q99873 361 aaKnown RBP13.83□□□□□ -0.2
TRAIP-210ENST00000489948 POMKQ9H5K3 350 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 DHX35Q9H5Z1 703 aaKnown RBP13.83□□□□□ -0.2
TRAIP-210ENST00000489948 RETREG1Q9H6L5 497 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 GPATCH2LQ9NWQ4 482 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 SMPD4Q9NXE4 827 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 CDH22Q9UJ99 828 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 USP15Q9Y4E8 981 aaPredicted RBP13.83□□□□□ -0.2
TRAIP-210ENST00000489948 HS3ST4Q9Y661 456 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 UNC80Q8N2C7 3258 aa13.83□□□□□ -0.2
TRAIP-210ENST00000489948 hCG_1818297A0A087WSY0 165 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 LRRD1A4D1F6 860 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 H3BRJ5 948 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 GFRA2O00451 464 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 ACSL4O60488 711 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 MOCS2O96007 188 aaPredicted RBP13.82□□□□□ -0.2
TRAIP-210ENST00000489948 KLKB1P03952 638 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 HMBSP08397 361 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 PYGMP11217 842 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 FCARP24071 287 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 CETN2P41208 172 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 MLLT6P55198 1093 aaPredicted RBP13.82□□□□□ -0.2
TRAIP-210ENST00000489948 DPYSQ14117 519 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 KRT81Q14533 505 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 ATP13A4Q4VNC1 1196 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 ODF2Q5BJF6 829 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 FAM133BQ5BKY9 247 aaKnown RBP13.82□□□□□ -0.2
TRAIP-210ENST00000489948 TFDP3Q5H9I0 405 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 MS4A13Q5J8X5 152 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 ADGRF1Q5T601 910 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 MFSD7Q6UXD7 560 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 SPOCD1Q6ZMY3 1216 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 ARID3BQ8IVW6 561 aaPredicted RBP13.82□□□□□ -0.2
TRAIP-210ENST00000489948 CPXM2Q8N436 756 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 CELF5Q8N6W0 485 aaKnown RBP13.82□□□□□ -0.2
TRAIP-210ENST00000489948 KCTD6Q8NC69 237 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 ACTRT1Q8TDG2 376 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 SH3RF2Q8TEC5 729 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 E2F7Q96AV8 911 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 ACSF2Q96CM8 615 aaPredicted RBP13.82□□□□□ -0.2
TRAIP-210ENST00000489948 OTUB2Q96DC9 234 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 DDX50Q9BQ39 737 aaKnown RBP13.82□□□□□ -0.2
TRAIP-210ENST00000489948 TMPRSS4Q9NRS4 437 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 GKN1Q9NS71 199 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 KLHL11Q9NVR0 708 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 CFAP97Q9P2B7 532 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 EPS15L1Q9UBC2 864 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 PPARGC1AQ9UBK2 798 aaKnown RBP13.82□□□□□ -0.2
TRAIP-210ENST00000489948 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 OR12D3Q9UGF7 316 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 XPO7Q9UIA9 1087 aaKnown RBP13.82□□□□□ -0.2
TRAIP-210ENST00000489948 AGO1Q9UL18 857 aaKnown RBP13.82□□□□□ -0.2
TRAIP-210ENST00000489948 CCL26Q9Y258 94 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 SH3BP1Q9Y3L3 701 aa13.82□□□□□ -0.2
TRAIP-210ENST00000489948 FGF10O15520 208 aaPredicted RBP13.81□□□□□ -0.2
TRAIP-210ENST00000489948 MBTPS2O43462 519 aa13.81□□□□□ -0.2
TRAIP-210ENST00000489948 CD48P09326 243 aa13.81□□□□□ -0.2
TRAIP-210ENST00000489948 IRF1P10914 325 aa13.81□□□□□ -0.2
TRAIP-210ENST00000489948 KCNA5P22460 613 aa13.81□□□□□ -0.2
TRAIP-210ENST00000489948 IL4RP24394 825 aa13.81□□□□□ -0.2
TRAIP-210ENST00000489948 ARL4AP40617 200 aa13.81□□□□□ -0.2
TRAIP-210ENST00000489948 DNA2P51530 1060 aa13.81□□□□□ -0.2
TRAIP-210ENST00000489948 KLF1Q13351 362 aaPredicted RBP13.81□□□□□ -0.2
TRAIP-210ENST00000489948 LEXMQ3ZCV2 418 aa13.81□□□□□ -0.2
TRAIP-210ENST00000489948 FAM78AQ5JUQ0 283 aa13.81□□□□□ -0.2
TRAIP-210ENST00000489948 TTC39BQ5VTQ0 682 aaPredicted RBP13.81□□□□□ -0.2
TRAIP-210ENST00000489948 NADSYN1Q6IA69 706 aa13.81□□□□□ -0.2
TRAIP-210ENST00000489948 EP400NLQ6ZTU2 488 aa13.81□□□□□ -0.2
TRAIP-210ENST00000489948 PYROXD2Q8N2H3 581 aa13.81□□□□□ -0.2
TRAIP-210ENST00000489948 RIN3Q8TB24 985 aa13.81□□□□□ -0.2
TRAIP-210ENST00000489948 HLA-CQ95604 372 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms