RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 C4orf47A7E2U8 309 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 KPNA5O15131 536 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 ZSCAN9O15535 394 aaPredicted RBP3.56□□□□□ -1.84
CPSF3-205ENST00000489629 SLC28A2O43868 658 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 PQBP1O60828 265 aaKnown RBP3.56□□□□□ -1.84
CPSF3-205ENST00000489629 SYF2O95926 243 aaKnown RBP3.56□□□□□ -1.84
CPSF3-205ENST00000489629 SLC3A2P08195 630 aaKnown RBP3.56□□□□□ -1.84
CPSF3-205ENST00000489629 RFPL3SP0C7P2 107 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 SLC5A1P13866 664 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 AKR1A1P14550 325 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 PECAM1P16284 738 aaPredicted RBP3.56□□□□□ -1.84
CPSF3-205ENST00000489629 ARRB2P32121 409 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 PGGT1BP53609 377 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 P2RX3P56373 397 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 DLGAP5Q15398 846 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 DHRS13Q6UX07 377 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 C16orf89Q6UX73 402 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 DLK2Q6UY11 383 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 B4GALNT4Q76KP1 1039 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 DGKHQ86XP1 1220 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 ZFPM2Q8WW38 1151 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 KAT2BQ92831 832 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 TTC17Q96AE7 1141 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 EME1Q96AY2 570 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 ZNF479Q96JC4 524 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 SNX27Q96L92 541 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 NUDT22Q9BRQ3 303 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 WDR83Q9BRX9 315 aaKnown RBP3.56□□□□□ -1.84
CPSF3-205ENST00000489629 PCDHAC1Q9H158 963 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 ERVK-5Q9HDB9 667 aa3.56□□□□□ -1.84
CPSF3-205ENST00000489629 LOC105371045A0A1W2PR82 267 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 GXYLT2A0PJZ3 443 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 A6NNC1 897 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 ZC3H11AO75152 810 aaKnown RBP eCLIP3.55□□□□□ -1.84
CPSF3-205ENST00000489629 KAT7O95251 611 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 T-ENOLP0DO92 83 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 CHRNB1P11230 501 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 PLA2G2AP14555 144 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 EGR1P18146 543 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 ATF3P18847 181 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 SLC8A1P32418 973 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 GSTM5P46439 218 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 ZXDBP98169 803 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 PPATQ06203 517 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 PTGR1Q14914 329 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 ANXA2RQ3ZCQ2 193 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 GLE1Q53GS7 698 aaKnown RBP3.55□□□□□ -1.84
CPSF3-205ENST00000489629 ARHGAP15Q53QZ3 475 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 LIPMQ5VYY2 423 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 BEND5Q7L4P6 421 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 ADHFE1Q8IWW8 467 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 TMEM199Q8N511 208 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 EXD3Q8N9H8 876 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 CCDC150Q8NCX0 1101 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 GPR78Q96P69 363 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 ZPBPQ9BS86 351 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 FZD3Q9NPG1 666 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 B3GNT3Q9Y2A9 372 aa3.55□□□□□ -1.84
CPSF3-205ENST00000489629 NOTCH4Q99466 2003 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 LACTBL1A8MY62 500 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 PPP6R2O75170 966 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 NDST3O95803 873 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 NGFRP08138 427 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 STT3AP46977 705 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 ZNF585BQ52M93 769 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 KIAA1755Q5JYT7 1200 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 ISM2Q6H9L7 571 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 MSANTD2Q6P1R3 559 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 DDIASQ8IXT1 998 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 CCDC33Q8N5R6 958 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 GLIS1Q8NBF1 620 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 OR52N4Q8NGI2 321 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 NPIPB3Q92617 1050 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 PAAF1Q9BRP4 392 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 TRIM2Q9C040 744 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 KCNK9Q9NPC2 374 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 RGL1Q9NZL6 768 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 IPO11Q9UI26 975 aaKnown RBP3.54□□□□□ -1.84
CPSF3-205ENST00000489629 ANAPC4Q9UJX5 808 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 UTS2RQ9UKP6 389 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 PROCRQ9UNN8 238 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 LAMP3Q9UQV4 416 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 MAN2B2Q9Y2E5 1009 aa3.54□□□□□ -1.84
CPSF3-205ENST00000489629 PRSS44E7EML9 344 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 APOL1O14791 398 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 NPC1O15118 1278 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 VIPP01282 170 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 IFNA2P01563 188 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 PRIM2P49643 509 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 MAPKAPK3Q16644 382 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 C6orf10Q5SRN2 563 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 C18orf65Q6ZTR6 163 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 TRAPPC11Q7Z392 1133 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 PAQR4Q8N4S7 273 aaPredicted RBP3.53□□□□□ -1.84
CPSF3-205ENST00000489629 FAM47BQ8NA70 645 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 PMM1Q92871 262 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 GRAMD1AQ96CP6 724 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 CLMNQ96JQ2 1002 aa3.53□□□□□ -1.84
CPSF3-205ENST00000489629 ZNF347Q96SE7 839 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms