RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 ANHXE9PGG2 379 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 TNNT1P13805 278 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 L1CAMP32004 1257 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 GJC1P36383 396 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 MLLT6P55198 1093 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-221ENST00000489562 RWDD2BP57060 319 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 SMTNL2Q2TAL5 461 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 MS4A13Q5J8X5 152 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 TXNRD3NBQ6F5E7 133 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 LRRC31Q6UY01 552 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 MFSD6LQ8IWD5 586 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 FAM217AQ8IXS0 508 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 ZDHHC14Q8IZN3 488 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 CPXM2Q8N436 756 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 EXD1Q8NHP7 514 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 HSPH1Q92598 858 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 RBM41Q96IZ5 413 aaKnown RBP14.37□□□□□ -0.11
C9orf3-221ENST00000489562 EPAS1Q99814 870 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 DHX35Q9H5Z1 703 aaKnown RBP14.37□□□□□ -0.11
C9orf3-221ENST00000489562 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.37□□□□□ -0.11
C9orf3-221ENST00000489562 RCOR3Q9P2K3 495 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-221ENST00000489562 OR12D3Q9UGF7 316 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 HS3ST4Q9Y661 456 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 MYO10Q9HD67 2058 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 MYOFQ9NZM1 2061 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 ESPNB1AK53 854 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 F5H5T6 163 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 I6L893 689 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-221ENST00000489562 ZRANB2O95218 330 aaKnown RBP eCLIP14.36□□□□□ -0.11
C9orf3-221ENST00000489562 KRT1P04264 644 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 TACR2P21452 398 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 ARL4AP40617 200 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 CETN2P41208 172 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 VIPR2P41587 438 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 PEX5P50542 639 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 CDH6P55285 790 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 COPS2P61201 443 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 SEMA3BQ13214 749 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 HTR4Q13639 388 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 KRT81Q14533 505 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 KCNT1Q5JUK3 1230 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 PIK3R6Q5UE93 754 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 TTC39BQ5VTQ0 682 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-221ENST00000489562 TANGO2Q6ICL3 276 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 CHSY1Q86X52 802 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 BBS7Q8IWZ6 715 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 RCOR2Q8IZ40 523 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 KCTD6Q8NC69 237 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 TTC16Q8NEE8 873 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 FAM71BQ8TC56 605 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 KRT35Q92764 455 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 WBP2Q969T9 261 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 C16orf45Q96MC5 204 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-221ENST00000489562 NAPGQ99747 312 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-221ENST00000489562 PRMT1Q99873 361 aaKnown RBP14.36□□□□□ -0.11
C9orf3-221ENST00000489562 TLR10Q9BXR5 811 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 SIK2Q9H0K1 926 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 RETREG1Q9H6L5 497 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 ANLNQ9NQW6 1124 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 PRKAG3Q9UGI9 489 aa14.36□□□□□ -0.11
C9orf3-221ENST00000489562 XPO7Q9UIA9 1087 aaKnown RBP14.36□□□□□ -0.11
C9orf3-221ENST00000489562 TYW5A2RUC4 315 aaKnown RBP14.35□□□□□ -0.11
C9orf3-221ENST00000489562 LRRD1A4D1F6 860 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 CTAGE9A4FU28 777 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 C2CD4DB7Z1M9 353 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 H3BRJ5 948 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 DDX3YO15523 660 aaKnown RBP14.35□□□□□ -0.11
C9orf3-221ENST00000489562 PSMC3P17980 439 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 KDELR1P24390 212 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 IFNAR2P48551 515 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 HCAR3P49019 387 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 TFF2Q03403 129 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 FCHO2Q0JRZ9 810 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 AUHQ13825 339 aaKnown RBP14.35□□□□□ -0.11
C9orf3-221ENST00000489562 PDGFRLQ15198 375 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 FAM133BQ5BKY9 247 aaKnown RBP14.35□□□□□ -0.11
C9orf3-221ENST00000489562 PPP6R3Q5H9R7 873 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-221ENST00000489562 RABGAP1LQ5R372 815 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 RAP1GAP2Q684P5 730 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 NADSYN1Q6IA69 706 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 VITQ6UXI7 678 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 YAF2Q8IY57 180 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 OSCP1Q8WVF1 389 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 RSPRY1Q96DX4 576 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 WDR24Q96S15 920 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 KCTD15Q96SI1 283 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-221ENST00000489562 ZNF670Q9BS34 389 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 CARD9Q9H257 536 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 PRDM16Q9HAZ2 1276 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 PCDH18Q9HCL0 1135 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 TMPRSS4Q9NRS4 437 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 GPATCH2LQ9NWQ4 482 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 DUS2Q9NX74 493 aaKnown RBP14.35□□□□□ -0.11
C9orf3-221ENST00000489562 DONSONQ9NYP3 566 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 IGSF9Q9P2J2 1179 aa14.35□□□□□ -0.11
C9orf3-221ENST00000489562 PPARGC1AQ9UBK2 798 aaKnown RBP14.35□□□□□ -0.11
C9orf3-221ENST00000489562 PACSIN2Q9UNF0 486 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-221ENST00000489562 IGLV3-10A0A075B6K4 115 aa14.34□□□□□ -0.11
C9orf3-221ENST00000489562 E9PAM4 449 aa14.34□□□□□ -0.11
C9orf3-221ENST00000489562 EEF2KO00418 725 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms