RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 CCDC33Q8N5R6 958 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 ZNF513Q8N8E2 541 aaPredicted RBP17.99■□□□□ 0.47
MDC1-206ENST00000489540 IL17RCQ8NAC3 791 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 SYN2Q92777 582 aaPredicted RBP17.99■□□□□ 0.47
MDC1-206ENST00000489540 PHOX2BQ99453 314 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 COX16Q9P0S2 106 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 MMP17Q9ULZ9 603 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 PAXBP1Q9Y5B6 917 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 R4GN57 208 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 PRRT4C9JH25 899 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 TBL1XO60907 577 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 LILRB5O75023 590 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 KLF8O95600 359 aaPredicted RBP17.98■□□□□ 0.47
MDC1-206ENST00000489540 CHRM1P11229 460 aaPredicted RBP17.98■□□□□ 0.47
MDC1-206ENST00000489540 GSCP56915 257 aaPredicted RBP17.98■□□□□ 0.47
MDC1-206ENST00000489540 C1QBPQ07021 282 aaKnown RBP17.98■□□□□ 0.47
MDC1-206ENST00000489540 KLHL30Q0D2K2 578 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 PTP4A2Q12974 167 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 MS4A13Q5J8X5 152 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 ALLCQ8N6M5 410 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 TXNDC5Q8NBS9 432 aaKnown RBP17.98■□□□□ 0.47
MDC1-206ENST00000489540 HJURPQ8NCD3 748 aaPredicted RBP17.98■□□□□ 0.47
MDC1-206ENST00000489540 UCMAQ8WVF2 138 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 NKD2Q969F2 451 aaPredicted RBP17.98■□□□□ 0.47
MDC1-206ENST00000489540 SYT11Q9BT88 431 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 XPO4Q9C0E2 1151 aaKnown RBP17.98■□□□□ 0.47
MDC1-206ENST00000489540 HAUS4Q9H6D7 363 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 WDCPQ9H6R7 721 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 CLEC4EQ9ULY5 219 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 CAPN11Q9UMQ6 739 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.98■□□□□ 0.478e-11■□□□□ 10.7
MDC1-206ENST00000489540 APBB3O95704 486 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 TACR2P21452 398 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 CNR2P34972 360 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 FLT3P36888 993 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 FNTBP49356 437 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 CXCR3P49682 368 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 SULT1E1P49888 294 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 DGKEP52429 567 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 ZBED6P86452 979 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 DEUP1Q05D60 604 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 CRY1Q16526 586 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 BRMS1LQ5PSV4 323 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 RNF43Q68DV7 783 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 SDE2Q6IQ49 451 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 ANKS1BQ7Z6G8 1248 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 CCDC117Q8IWD4 279 aaPredicted RBP17.98■□□□□ 0.47
MDC1-206ENST00000489540 RNF214Q8ND24 703 aa17.98■□□□□ 0.47
MDC1-206ENST00000489540 POLR3BQ9NW08 1133 aaPredicted RBP17.98■□□□□ 0.47
MDC1-206ENST00000489540 XPO7Q9UIA9 1087 aaKnown RBP17.98■□□□□ 0.47
MDC1-206ENST00000489540 LUC7L2Q9Y383 392 aaKnown RBP17.98■□□□□ 0.47
MDC1-206ENST00000489540 BZW2Q9Y6E2 419 aaKnown RBP17.98■□□□□ 0.47
MDC1-206ENST00000489540 ITIH6Q6UXX5 1313 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 ANTXRLA6NF34 631 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 F5H5T6 163 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 NPC1O15118 1278 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 KRT3P12035 628 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 HNRNPLP14866 589 aaKnown RBP eCLIP17.97■□□□□ 0.47
MDC1-206ENST00000489540 NTSR1P30989 418 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 EIF4HQ15056 248 aaKnown RBP17.97■□□□□ 0.47
MDC1-206ENST00000489540 ACBD5Q5T8D3 534 aaPredicted RBP17.97■□□□□ 0.47
MDC1-206ENST00000489540 HEATR6Q6AI08 1181 aaKnown RBP17.97■□□□□ 0.47
MDC1-206ENST00000489540 MON1BQ7L1V2 547 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 WDR5BQ86VZ2 330 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 CHSY1Q86X52 802 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 LGI2Q8N0V4 545 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 TSTD1Q8NFU3 115 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 VCPIP1Q96JH7 1222 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 TBCBQ99426 244 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 SELENOOQ9BVL4 669 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 METTL5Q9NRN9 209 aaKnown RBP17.97■□□□□ 0.47
MDC1-206ENST00000489540 PIGVQ9NUD9 493 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 ELOVL2Q9NXB9 296 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 EBF1Q9UH73 591 aa17.97■□□□□ 0.47
MDC1-206ENST00000489540 SIGLEC16A6NMB1 481 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 SGK1O00141 431 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 ALDH1A2O94788 518 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 PDGFRAP16234 1089 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 SGSHP51688 502 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 RPS24P62847 133 aaKnown RBP17.96■□□□□ 0.47
MDC1-206ENST00000489540 DMWDQ09019 674 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 GEN1Q17RS7 908 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 OTUD1Q5VV17 481 aaPredicted RBP17.96■□□□□ 0.47
MDC1-206ENST00000489540 EGFLAMQ63HQ2 1017 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 RAP1GAP2Q684P5 730 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 ZNF571Q7Z3V5 609 aaPredicted RBP17.96■□□□□ 0.47
MDC1-206ENST00000489540 PHLDB2Q86SQ0 1253 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 CHPFQ8IZ52 775 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 MCOLN2Q8IZK6 566 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.96■□□□□ 0.47
MDC1-206ENST00000489540 C3orf20Q8ND61 904 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 FIBINQ8TAL6 211 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 WFIKKN2Q8TEU8 576 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 CPLX3Q8WVH0 158 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 RXFP2Q8WXD0 754 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 CFAP57Q96MR6 1250 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 PRICKLE1Q96MT3 831 aaPredicted RBP17.96■□□□□ 0.47
MDC1-206ENST00000489540 HHIPQ96QV1 700 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 PRMT1Q99873 361 aaKnown RBP17.96■□□□□ 0.47
MDC1-206ENST00000489540 POLMQ9NP87 494 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms