RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 MAVSQ7Z434 540 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 PEG10Q86TG7 708 aaKnown RBP4.83□□□□□ -1.64
XRN1-213ENST00000489241 CAND1Q86VP6 1230 aaKnown RBP4.83□□□□□ -1.64
XRN1-213ENST00000489241 LRRC71Q8N4P6 559 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 TCP11L2Q8N4U5 519 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 RP9Q8TA86 221 aaKnown RBP4.83□□□□□ -1.64
XRN1-213ENST00000489241 SLC22A17Q8WUG5 538 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 RFFLQ8WZ73 363 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 ST8SIA4Q92187 359 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 CENPIQ92674 756 aaPredicted RBP4.83□□□□□ -1.64
XRN1-213ENST00000489241 ZUFSPQ96AP4 578 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 PAAF1Q9BRP4 392 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 TRIM36Q9NQ86 728 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 IRAK4Q9NWZ3 460 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 FOXJ2Q9P0K8 574 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 NKX1-2Q9UD57 310 aaPredicted RBP4.83□□□□□ -1.64
XRN1-213ENST00000489241 ARHGAP26Q9UNA1 814 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 ZBTB1Q9Y2K1 713 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 PCDHB7Q9Y5E2 793 aa4.83□□□□□ -1.64
XRN1-213ENST00000489241 LOC105369274A0A096LPK9 316 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 LOC102723532A0A0G2JNH3 316 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 VWA3AA6NCI4 1184 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 SLC38A8A6NNN8 435 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 QSOX1O00391 747 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 EXOC5O00471 708 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 MGST3O14880 152 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 DDX58O95786 925 aaKnown RBP4.82□□□□□ -1.64
XRN1-213ENST00000489241 HSP90AA1P07900 732 aaKnown RBP4.82□□□□□ -1.64
XRN1-213ENST00000489241 CDK4P11802 303 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 CLCN2P51788 898 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 CASP6P55212 293 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 TPTEP56180 551 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 SUMO2P61956 95 aaKnown RBP4.82□□□□□ -1.64
XRN1-213ENST00000489241 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.82□□□□□ -1.64
XRN1-213ENST00000489241 P3H1Q32P28 736 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 CTXN3Q4LDR2 81 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 ZNF362Q5T0B9 420 aaPredicted RBP4.82□□□□□ -1.64
XRN1-213ENST00000489241 CCDC30Q5VVM6 783 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 FAM90A2PQ658T7 463 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 ACAD10Q6JQN1 1059 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 MTHFD1LQ6UB35 978 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 C4orf50Q6ZRC1 276 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 RINLQ6ZS11 566 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 OR4N4Q8N0Y3 316 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 USP38Q8NB14 1042 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 UCMAQ8WVF2 138 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 R3HDM4Q96D70 268 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 KTI12Q96EK9 354 aaPredicted RBP4.82□□□□□ -1.64
XRN1-213ENST00000489241 CCDC134Q9H6E4 229 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 LIN7CQ9NUP9 197 aaKnown RBP4.82□□□□□ -1.64
XRN1-213ENST00000489241 SLC17A6Q9P2U8 582 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 AASSQ9UDR5 926 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 STEAP1Q9UHE8 339 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 AFG3L2Q9Y4W6 797 aa4.82□□□□□ -1.64
XRN1-213ENST00000489241 M0QYT0 321 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 M0QZQ0 153 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 IGLV2-14P01704 120 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 DRD1P21728 446 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 GKP32189 559 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 GSTM5P46439 218 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 CACNA2D1P54289 1103 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 FAM3BP58499 235 aaPredicted RBP4.81□□□□□ -1.64
XRN1-213ENST00000489241 EIF4A1P60842 406 aaKnown RBP4.81□□□□□ -1.64
XRN1-213ENST00000489241 NHLH1Q02575 133 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 DCTN1Q14203 1278 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 AASDHQ4L235 1098 aaPredicted RBP4.81□□□□□ -1.64
XRN1-213ENST00000489241 ZNF484Q5JVG2 852 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 ZNF569Q5MCW4 686 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 DENND2CQ68D51 928 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 CCDC144NLQ6NUI1 221 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 SIRT6Q8N6T7 355 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 CCDC89Q8N998 374 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 NGDNQ8NEJ9 315 aaKnown RBP4.81□□□□□ -1.64
XRN1-213ENST00000489241 ABHD11Q8NFV4 315 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 ADAMTS18Q8TE60 1221 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 WDYHV1Q96HA8 205 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 CHCHD6Q9BRQ6 235 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 RMI1Q9H9A7 625 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 PLEKHA5Q9HAU0 1116 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 PLEKHA2Q9HB19 425 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 OLA1Q9NTK5 396 aaKnown RBP4.81□□□□□ -1.64
XRN1-213ENST00000489241 SEMA4GQ9NTN9 838 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 TBX20Q9UMR3 447 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 SLC45A1Q9Y2W3 748 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 LAS1LQ9Y4W2 734 aaKnown RBP4.81□□□□□ -1.64
XRN1-213ENST00000489241 FER1L4A9Z1Z3 1794 aa4.81□□□□□ -1.64
XRN1-213ENST00000489241 A0A087X0M5 115 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 A0A1B0GX30 115 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 A0A1W2PPH5 198 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 A6NCN8 305 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 LINC00473A8K010 186 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 F5H0A9 414 aaPredicted RBP4.8□□□□□ -1.64
XRN1-213ENST00000489241 INO80B-WBP1J3KQ70 363 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 KLK10O43240 276 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 TIMM44O43615 452 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 TSPAN3O60637 253 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 PMPCBO75439 489 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 HEXIM1O94992 359 aaKnown RBP4.8□□□□□ -1.64
XRN1-213ENST00000489241 NPSP0C0P6 89 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 EBLN1P0CF75 366 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms