RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ASIC3Q9UHC3 531 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 RAB21Q9UL25 225 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 DNPEPQ9ULA0 475 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 COL4A4P53420 1690 aaPredicted RBP10.36□□□□□ -0.75
USP11-211ENST00000489111 PTPRSQ13332 1948 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 CLUHO75153 1309 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 ESYT3A0FGR9 886 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 CCDC151A5D8V7 595 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 ZSCAN5CA6NGD5 496 aaPredicted RBP10.35□□□□□ -0.75
USP11-211ENST00000489111 KCNU1A8MYU2 1149 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 FAM72CH0Y354 149 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 I6L893 689 aaPredicted RBP10.35□□□□□ -0.75
USP11-211ENST00000489111 SGK1O00141 431 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 FGF10O15520 208 aaPredicted RBP10.35□□□□□ -0.75
USP11-211ENST00000489111 CLASP2O75122 1294 aaKnown RBP10.35□□□□□ -0.75
USP11-211ENST00000489111 LRIG2O94898 1065 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 ITGAVP06756 1048 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 HNRNPA1P09651 372 aaKnown RBP eCLIP10.35□□□□□ -0.75
USP11-211ENST00000489111 SRGAP2BP0DMP2 458 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 MYL4P12829 197 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 H2AFXP16104 143 aaPredicted RBP10.35□□□□□ -0.75
USP11-211ENST00000489111 AMPD1P23109 780 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 GABRR2P28476 465 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 TNFRSF8P28908 595 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 EPHB2P29323 1055 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 HOXA9P31269 272 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 SERPINB6P35237 376 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 GGCXP38435 758 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 PTGIRP43119 386 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 HARS2P49590 506 aaKnown RBP10.35□□□□□ -0.75
USP11-211ENST00000489111 COG7P83436 770 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 PTK6Q13882 451 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 HLTFQ14527 1009 aaKnown RBP eCLIP10.35□□□□□ -0.75
USP11-211ENST00000489111 FAM72AQ5TYM5 149 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 NCBP2-AS2Q69YL0 99 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 FAM72DQ6L9T8 149 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 DARS2Q6PI48 645 aaKnown RBP10.35□□□□□ -0.75
USP11-211ENST00000489111 FBXO38Q6PIJ6 1188 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 NPNTQ6UXI9 565 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 LRRC31Q6UY01 552 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 FAM72BQ86X60 149 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 UNC45BQ8IWX7 931 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 GDPD5Q8WTR4 605 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 PLD4Q96BZ4 506 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 HINFPQ9BQA5 517 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 FERMT1Q9BQL6 677 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 CORO1BQ9BR76 489 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 MAGEB5Q9BZ81 275 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 TRIM31Q9BZY9 425 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 DPH5Q9H2P9 285 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 GDF3Q9NR23 364 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 FAM114A2Q9NRY5 505 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 DRG1Q9Y295 367 aaKnown RBP10.35□□□□□ -0.75
USP11-211ENST00000489111 SNX10Q9Y5X0 201 aa10.35□□□□□ -0.75
USP11-211ENST00000489111 CFAP69A5D8W1 941 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 C2orf78A6NCI8 922 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 MFSD11O43934 449 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 ZNF189O75820 626 aaPredicted RBP10.34□□□□□ -0.75
USP11-211ENST00000489111 OAS1P00973 400 aaKnown RBP10.34□□□□□ -0.75
USP11-211ENST00000489111 IFNB1P01574 187 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 IGLV3-27P01718 113 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 RBP3P10745 1247 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 MBL2P11226 248 aaPredicted RBP10.34□□□□□ -0.75
USP11-211ENST00000489111 EPCAMP16422 314 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 ERCC2P18074 760 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 SLC11A2P49281 568 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 NRG1Q02297 640 aaPredicted RBP10.34□□□□□ -0.75
USP11-211ENST00000489111 GBE1Q04446 702 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 CALCOCO2Q13137 446 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 CAMK1Q14012 370 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 OASLQ15646 514 aaKnown RBP10.34□□□□□ -0.75
USP11-211ENST00000489111 DUPD1Q68J44 220 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 ZC3H18Q86VM9 953 aaKnown RBP10.34□□□□□ -0.75
USP11-211ENST00000489111 CHSY1Q86X52 802 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 TDHQ8IZJ6 230 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 ALLCQ8N6M5 410 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 LEMD2Q8NC56 503 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 SLC22A17Q8WUG5 538 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 CASKIN2Q8WXE0 1202 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 PPP2R3CQ969Q6 453 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 QKIQ96PU8 341 aaKnown RBP eCLIP10.34□□□□□ -0.75
USP11-211ENST00000489111 TMEM121Q9BTD3 319 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 ATXN3LQ9H3M9 355 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 CATSPERBQ9H7T0 1116 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 TLE6Q9H808 572 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 IL21Q9HBE4 155 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 ARFGAP3Q9NP61 516 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 RAD54BQ9Y620 910 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 HS3ST4Q9Y661 456 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 KIAA1671Q9BY89 1806 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 PTPRDP23468 1912 aa10.34□□□□□ -0.75
USP11-211ENST00000489111 TRAV19A0A0A6YYK7 116 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 HACD1B0YJ81 288 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 E9PAM4 449 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 NDC80O14777 642 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 PPP1R12AO14974 1030 aaPredicted RBP10.33□□□□□ -0.76
USP11-211ENST00000489111 PER2O15055 1255 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 DCLK1O15075 740 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 RFPL2O75678 378 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 STK10O94804 968 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms