RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 DPYSL4O14531 572 aa20.08■□□□□ 0.8
HMG20B-213ENST00000488973 LRRC36Q1X8D7 754 aa20.08■□□□□ 0.8
HMG20B-213ENST00000488973 STEAP4Q687X5 459 aa20.08■□□□□ 0.8
HMG20B-213ENST00000488973 C16orf46Q6P387 395 aa20.08■□□□□ 0.8
HMG20B-213ENST00000488973 FAM183BPQ6ZVS7 135 aa20.08■□□□□ 0.8
HMG20B-213ENST00000488973 MAVSQ7Z434 540 aa20.08■□□□□ 0.8
HMG20B-213ENST00000488973 RNF149Q8NC42 400 aa20.08■□□□□ 0.8
HMG20B-213ENST00000488973 BTBD9Q96Q07 612 aa20.08■□□□□ 0.8
HMG20B-213ENST00000488973 NDUFA13Q9P0J0 144 aa20.08■□□□□ 0.8
HMG20B-213ENST00000488973 POMPQ9Y244 141 aa20.08■□□□□ 0.8
HMG20B-213ENST00000488973 SMIM31A0A1B0GVY4 71 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 ZNF487B1APH4 448 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 AP1G1O43747 822 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 TOMM70O94826 608 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 PEX2P28328 305 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 OSTNP61366 133 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 TNFAIP1Q13829 316 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 PCLAFQ15004 111 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 R3HDM1Q15032 1099 aaKnown RBP20.07■□□□□ 0.8
HMG20B-213ENST00000488973 CCDC14Q49A88 953 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 CCDC80Q76M96 950 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 C1orf127Q8N9H9 656 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 UBA3Q8TBC4 463 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 NAT14Q8WUY8 206 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 EPB41L1Q9H4G0 881 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 OCEL1Q9H607 264 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 SF3B1O75533 1304 aaKnown RBP eCLIP20.07■□□□□ 0.89e-6■■■■■ 68.9
HMG20B-213ENST00000488973 ALDOAP04075 364 aaKnown RBP20.07■□□□□ 0.8
HMG20B-213ENST00000488973 FAM200BP0CF97 657 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 KCNA4P22459 653 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 PDE1CQ14123 709 aaPredicted RBP20.07■□□□□ 0.8
HMG20B-213ENST00000488973 MMEL1Q495T6 779 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 PDPK2PQ6A1A2 396 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 SCYL2Q6P3W7 929 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 DNERQ8NFT8 737 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 HEXIM2Q96MH2 286 aaKnown RBP20.07■□□□□ 0.8
HMG20B-213ENST00000488973 SORT1Q99523 831 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 GPATCH2LQ9NWQ4 482 aa20.07■□□□□ 0.8
HMG20B-213ENST00000488973 PPP1R1BQ9UD71 204 aaPredicted RBP20.07■□□□□ 0.8
HMG20B-213ENST00000488973 ACKR2O00590 384 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 MDM4O15151 490 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 GAS2O43903 313 aaKnown RBP20.06■□□□□ 0.8
HMG20B-213ENST00000488973 PDE5AO76074 875 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 FARP2O94887 1054 aaPredicted RBP20.06■□□□□ 0.8
HMG20B-213ENST00000488973 MAP3K6O95382 1288 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 ITGAXP20702 1163 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 PRDX6P30041 224 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 DLG1Q12959 904 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 ANKRD20A4Q4UJ75 823 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 ATF7IP2Q5U623 682 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 FBXW8Q8N3Y1 598 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 RPF1Q9H9Y2 349 aaKnown RBP20.06■□□□□ 0.8
HMG20B-213ENST00000488973 SCN4AP35499 1836 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 ZNF195O14628 629 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 TPP1O14773 563 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 UBA1P22314 1058 aaKnown RBP20.06■□□□□ 0.8
HMG20B-213ENST00000488973 GRIA2P42262 883 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 NIPAL4Q0D2K0 466 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 SEMA5AQ13591 1074 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 INSCQ1MX18 579 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 CDKL2Q92772 493 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 PIWIL1Q96J94 861 aaKnown RBP20.06■□□□□ 0.8
HMG20B-213ENST00000488973 SNRNP25Q9BV90 132 aaKnown RBP20.06■□□□□ 0.8
HMG20B-213ENST00000488973 VRTNQ9H8Y1 702 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 GBA2Q9HCG7 927 aaPredicted RBP20.06■□□□□ 0.8
HMG20B-213ENST00000488973 PNPOQ9NVS9 261 aa20.06■□□□□ 0.8
HMG20B-213ENST00000488973 FZD9O00144 591 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 CXCL8P10145 99 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 ACAT1P24752 427 aaKnown RBP20.05■□□□□ 0.8
HMG20B-213ENST00000488973 ATICP31939 592 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 CHN2P52757 468 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 NAB1Q13506 487 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 PDK3Q15120 406 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 TRIP10Q15642 601 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 PACS1Q6VY07 963 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 KBTBD6Q86V97 674 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 DEFB107AQ8IZN7 70 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 FAM167AQ96KS9 214 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 AS3MTQ9HBK9 375 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 NGRNQ9NPE2 291 aaKnown RBP20.05■□□□□ 0.8
HMG20B-213ENST00000488973 GRAP2O75791 330 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 SORBS2O94875 1100 aaKnown RBP20.05■□□□□ 0.8
HMG20B-213ENST00000488973 MLNP12872 115 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 P4HA1P13674 534 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 RAG1P15918 1043 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 SERPINB6P35237 376 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 HARS2P49590 506 aaKnown RBP20.05■□□□□ 0.8
HMG20B-213ENST00000488973 CA9Q16790 459 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 SH2D4BQ5SQS7 431 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 UGT2A3Q6UWM9 527 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 LCLAT1Q6UWP7 414 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 ZNF280CQ8ND82 737 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 C12orf42Q96LP6 360 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 CYP4F11Q9HBI6 524 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 XPNPEP3Q9NQH7 507 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 TMEM98Q9Y2Y6 226 aa20.05■□□□□ 0.8
HMG20B-213ENST00000488973 MYO18AQ92614 2054 aaKnown RBP20.04■□□□□ 0.8
HMG20B-213ENST00000488973 PIK3R2O00459 728 aa20.04■□□□□ 0.8
HMG20B-213ENST00000488973 ITGB3P05106 788 aa20.04■□□□□ 0.8
HMG20B-213ENST00000488973 NFICP08651 508 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms