RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 TPGS1Q6ZTW0 290 aa16.54■□□□□ 0.24
HDAC7-224ENST00000488927 FAM131BQ86XD5 332 aa16.54■□□□□ 0.24
HDAC7-224ENST00000488927 DDI1Q8WTU0 396 aa16.54■□□□□ 0.24
HDAC7-224ENST00000488927 RFFLQ8WZ73 363 aa16.54■□□□□ 0.24
HDAC7-224ENST00000488927 FAM3CQ92520 227 aa16.54■□□□□ 0.24
HDAC7-224ENST00000488927 NTAN1Q96AB6 310 aa16.54■□□□□ 0.24
HDAC7-224ENST00000488927 TMA16Q96EY4 203 aaKnown RBP16.54■□□□□ 0.24
HDAC7-224ENST00000488927 C1orf74Q96LT6 269 aa16.54■□□□□ 0.24
HDAC7-224ENST00000488927 PCDHA13Q9Y5I0 950 aa16.54■□□□□ 0.24
HDAC7-224ENST00000488927 MUC3AQ02505 3323 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 KANSL1LA0AUZ9 987 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 NEDD8-MDP1E9PL57 170 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 GFRA2O00451 464 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 TRDMT1O14717 391 aaKnown RBP16.53■□□□□ 0.24
HDAC7-224ENST00000488927 CACNG3O60359 315 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 PAGE1O75459 146 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 TYRP14679 529 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 TACR2P21452 398 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 ADRA1BP35368 520 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 PCK1P35558 622 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 SOX9P48436 509 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 OGDHQ02218 1023 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 TCEAL1Q15170 157 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 MS4A13Q5J8X5 152 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 RABGAP1LQ5R372 815 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 SH3PXD2AQ5TCZ1 1133 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 PIK3R6Q5UE93 754 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 NADSYN1Q6IA69 706 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 RAD9BQ6WBX8 426 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 NUDT18Q6ZVK8 323 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 CHSY1Q86X52 802 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 LRRC8AQ8IWT6 810 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 NIPA2Q8N8Q9 360 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 HJURPQ8NCD3 748 aaPredicted RBP16.53■□□□□ 0.24
HDAC7-224ENST00000488927 CD101Q93033 1021 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 CALR3Q96L12 384 aaKnown RBP16.53■□□□□ 0.24
HDAC7-224ENST00000488927 P2RY13Q9BPV8 354 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 OSBPL6Q9BZF3 934 aa16.53■□□□□ 0.24
HDAC7-224ENST00000488927 STK25O00506 426 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 NCAM2O15394 837 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 ARHGAP6O43182 974 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 MTA2O94776 668 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 SLC6A4P31645 630 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 ARHGAP25P42331 645 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 ATXN1P54253 815 aaKnown RBP16.52■□□□□ 0.24
HDAC7-224ENST00000488927 VCPP55072 806 aaKnown RBP16.52■□□□□ 0.24
HDAC7-224ENST00000488927 SCAPQ12770 1279 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 GRSF1Q12849 480 aaKnown RBP eCLIP16.52■□□□□ 0.24
HDAC7-224ENST00000488927 IER5LQ5T953 404 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 FYB2Q5VWT5 728 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 RAP1GAP2Q684P5 730 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 SCYL2Q6P3W7 929 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 LRRC31Q6UY01 552 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 BMP8AQ7Z5Y6 402 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 SLFN11Q7Z7L1 901 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 CCDC117Q8IWD4 279 aaPredicted RBP16.52■□□□□ 0.24
HDAC7-224ENST00000488927 ETFBKMTQ8IXQ9 262 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 CCDC26Q8TAB7 109 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 SLC35G2Q8TBE7 412 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 PRMT1Q99873 361 aaKnown RBP16.52■□□□□ 0.24
HDAC7-224ENST00000488927 C1QTNF1Q9BXJ1 281 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 SLC2A11Q9BYW1 496 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 EPHX3Q9H6B9 360 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 TBC1D17Q9HA65 648 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 DEC1Q9P2X7 70 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 XPO7Q9UIA9 1087 aaKnown RBP16.52■□□□□ 0.24
HDAC7-224ENST00000488927 HS3ST4Q9Y661 456 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 COL4A2P08572 1712 aa16.52■□□□□ 0.24
HDAC7-224ENST00000488927 A0A0A6YYK5 440 aaPredicted RBP16.51■□□□□ 0.23
HDAC7-224ENST00000488927 GOLGA6L7A0A1B0GV03 622 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 PRPSAP2O60256 369 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 DRD1P21728 446 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 NRG1Q02297 640 aaPredicted RBP16.51■□□□□ 0.23
HDAC7-224ENST00000488927 ZNF252P-AS1Q0IIN9 211 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 AUHQ13825 339 aaKnown RBP16.51■□□□□ 0.23
HDAC7-224ENST00000488927 GAB4Q2WGN9 574 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 TMEM196Q5HYL7 178 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 EFHC2Q5JST6 749 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 RFWD3Q6PCD5 774 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 PSTKQ8IV42 348 aaKnown RBP16.51■□□□□ 0.23
HDAC7-224ENST00000488927 LGI2Q8N0V4 545 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 PNKPQ96T60 521 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 TRIM7Q9C029 511 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 OSBPL2Q9H1P3 480 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 LTB4R2Q9NPC1 389 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 TICRRQ7Z2Z1 1910 aa16.51■□□□□ 0.23
HDAC7-224ENST00000488927 DLL1O00548 723 aa16.5■□□□□ 0.23
HDAC7-224ENST00000488927 TSPAN3O60637 253 aa16.5■□□□□ 0.23
HDAC7-224ENST00000488927 TBL1XO60907 577 aa16.5■□□□□ 0.23
HDAC7-224ENST00000488927 TULP3O75386 442 aa16.5■□□□□ 0.23
HDAC7-224ENST00000488927 LRCH4O75427 683 aa16.5■□□□□ 0.23
HDAC7-224ENST00000488927 HOXD9P28356 352 aaPredicted RBP16.5■□□□□ 0.23
HDAC7-224ENST00000488927 MAN1A1P33908 653 aa16.5■□□□□ 0.23
HDAC7-224ENST00000488927 OPRD1P41143 372 aa16.5■□□□□ 0.23
HDAC7-224ENST00000488927 GALK1P51570 392 aa16.5■□□□□ 0.23
HDAC7-224ENST00000488927 VAV2P52735 878 aa16.5■□□□□ 0.23
HDAC7-224ENST00000488927 HADHBP55084 474 aaKnown RBP16.5■□□□□ 0.23
HDAC7-224ENST00000488927 LRRC32Q14392 662 aa16.5■□□□□ 0.23
HDAC7-224ENST00000488927 UBXN2BQ14CS0 331 aa16.5■□□□□ 0.23
HDAC7-224ENST00000488927 PON2Q15165 354 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms