RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 MS4A13Q5J8X5 152 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 ANO7Q6IWH7 933 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 TRMT11Q7Z4G4 463 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 MDGA1Q8NFP4 955 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 WFDC5Q8TCV5 224 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 BAP1Q92560 729 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 NPY6RQ99463 290 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 GABRG3Q99928 467 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.55■□□□□ 0.241e-8■■■■■ 33.1
CTDSP1-209ENST00000488627 ELOVL2Q9NXB9 296 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 TMEM59LQ9UK28 342 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 A0A1W2PQC6 194 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 WASH3PC4AMC7 463 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 TBL1XO60907 577 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 RPP40O75818 363 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 MOCS2O96007 188 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 UNGP13051 313 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 TFE3P19532 575 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 TGM1P22735 817 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 MMP8P22894 467 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 WASP42768 502 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 RPS24P62847 133 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 PTP4A2Q12974 167 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 ENPP2Q13822 863 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 SKOR2Q2VWA4 1001 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 TRNP1Q6NT89 227 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 IRF2BP2Q7Z5L9 587 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 ANKS1BQ7Z6G8 1248 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 CHPFQ8IZ52 775 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 SLC30A5Q8TAD4 765 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 OLIG1Q8TAK6 271 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 BTN2A3PQ96KV6 586 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 PRMT1Q99873 361 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 DDX50Q9BQ39 737 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 DDIT4Q9NX09 232 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 CACNA2D2Q9NY47 1150 aa16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 THAP10Q9P2Z0 257 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-209ENST00000488627 DCLK1O15075 740 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 TIMM44O43615 452 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 APOEP02649 317 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 SLC2A3P11169 496 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 HOXB2P14652 356 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 GBP1P32455 592 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 FLT3P36888 993 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 RNASE9P60153 205 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 ARID5AQ03989 594 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 LAIR1Q6GTX8 287 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 KIAA1211LQ6NV74 962 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 TRIM72Q6ZMU5 477 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 MMS22LQ6ZRQ5 1243 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 PRR23BQ6ZRT6 265 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 ARCQ7LC44 396 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 BNIPLQ7Z465 357 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 ADIPOR2Q86V24 386 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 KBTBD6Q86V97 674 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 FAM160A2Q8N612 972 aaPredicted RBP16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 FIBINQ8TAL6 211 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 SORCS1Q8WY21 1168 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 ZC3H10Q96K80 434 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 SYT11Q9BT88 431 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 TPSD1Q9BZJ3 242 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 FAM204AQ9H8W3 233 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 POLMQ9NP87 494 aaPredicted RBP16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 ANLNQ9NQW6 1124 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 ABCB8Q9NUT2 735 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 RRN3Q9NYV6 651 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.53■□□□□ 0.241e-13■■□□□ 11.5
CTDSP1-209ENST00000488627 MYO6Q9UM54 1294 aa16.53■□□□□ 0.24
CTDSP1-209ENST00000488627 TCRBV21S2A2A0A5A6 115 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 I6L893 689 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 M0QYT0 321 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 CAVIN2O95810 425 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 TACR2P21452 398 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 CCR1P32246 355 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 CXCR3P49682 368 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 NME3Q13232 169 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 EIF4HQ15056 248 aaKnown RBP16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 FILIP1LQ4L180 1135 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 FAM102AQ5T9C2 384 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 RAP1GAP2Q684P5 730 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 CEP68Q76N32 757 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 CACNA2D4Q7Z3S7 1137 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 LGI2Q8N0V4 545 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 CFAP52Q8N1V2 620 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 ATP6V0D2Q8N8Y2 350 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 HJURPQ8NCD3 748 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 PGAP3Q96FM1 320 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 AGPAT1Q99943 283 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 TTYH3Q9C0H2 523 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 PIGVQ9NUD9 493 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 STIM2Q9P246 746 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 INVSQ9Y283 1065 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 STON1Q9Y6Q2 735 aa16.52■□□□□ 0.24
CTDSP1-209ENST00000488627 CFAP54Q96N23 3096 aa16.52■□□□□ 0.23
CTDSP1-209ENST00000488627 KIAA1549LQ6ZVL6 1849 aa16.52■□□□□ 0.23
CTDSP1-209ENST00000488627 MYO18AQ92614 2054 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-209ENST00000488627 SYNJ2BP-COX16A0A087WUM0 186 aa16.51■□□□□ 0.23
CTDSP1-209ENST00000488627 GOLGA8SH3BPF8 625 aa16.51■□□□□ 0.23
CTDSP1-209ENST00000488627 NPC1O15118 1278 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms