RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 TGM1P22735 817 aa24.62■■□□□ 1.53
RNF38-208ENST00000488058 SLC6A3Q01959 620 aa24.62■■□□□ 1.53
RNF38-208ENST00000488058 UBXN1Q04323 297 aa24.62■■□□□ 1.53
RNF38-208ENST00000488058 OLFML1Q6UWY5 402 aa24.62■■□□□ 1.53
RNF38-208ENST00000488058 HJURPQ8NCD3 748 aaPredicted RBP24.62■■□□□ 1.53
RNF38-208ENST00000488058 OLIG1Q8TAK6 271 aa24.62■■□□□ 1.53
RNF38-208ENST00000488058 RNF34Q969K3 372 aa24.62■■□□□ 1.53
RNF38-208ENST00000488058 PRICKLE1Q96MT3 831 aaPredicted RBP24.62■■□□□ 1.53
RNF38-208ENST00000488058 SLC2A13Q96QE2 648 aa24.62■■□□□ 1.53
RNF38-208ENST00000488058 ABCB8Q9NUT2 735 aa24.62■■□□□ 1.53
RNF38-208ENST00000488058 DDIT4Q9NX09 232 aa24.62■■□□□ 1.53
RNF38-208ENST00000488058 THAP10Q9P2Z0 257 aaPredicted RBP24.62■■□□□ 1.53
RNF38-208ENST00000488058 XPO7Q9UIA9 1087 aaKnown RBP24.62■■□□□ 1.53
RNF38-208ENST00000488058 SIK3Q9Y2K2 1263 aa24.62■■□□□ 1.53
RNF38-208ENST00000488058 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.62■■□□□ 1.53
RNF38-208ENST00000488058 THADAQ6YHU6 1953 aa24.62■■□□□ 1.53
RNF38-208ENST00000488058 MAP3K13O43283 966 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 LRP3O75074 770 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 MMEP08473 750 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 HLA-FP30511 346 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 IL12RB1P42701 662 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 LMNB2Q03252 620 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 STARD3Q14849 445 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 EIF4HQ15056 248 aaKnown RBP24.61■■□□□ 1.53
RNF38-208ENST00000488058 RAP1GAP2Q684P5 730 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 CHST9Q7L1S5 443 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 C11orf74Q86VG3 221 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 CHSY1Q86X52 802 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 NEK11Q8NG66 645 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 EPS8L1Q8TE68 723 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 RMDN1Q96DB5 314 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 CALCOCO1Q9P1Z2 691 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 GGA2Q9UJY4 613 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 SDK1Q7Z5N4 2213 aa24.61■■□□□ 1.53
RNF38-208ENST00000488058 DAB1O75553 588 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 IGLV3-25P01717 112 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 PABPC1P11940 636 aaKnown RBP24.6■■□□□ 1.53
RNF38-208ENST00000488058 ZNF18P17022 549 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 P2RY2P41231 377 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 RNASE9P60153 205 aaKnown RBP24.6■■□□□ 1.53
RNF38-208ENST00000488058 RPS24P62847 133 aaKnown RBP24.6■■□□□ 1.53
RNF38-208ENST00000488058 CREB5Q02930 508 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 ZNF234Q14588 700 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 CSRP2Q16527 193 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 TMEM215Q68D42 235 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 PRR23CQ6ZRP0 262 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 ERICH1Q86X53 443 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 MFN1Q8IWA4 741 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 LGI2Q8N0V4 545 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 CFAP52Q8N1V2 620 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 CARNMT1Q8N4J0 409 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 FRMD1Q8N878 549 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 ATP6V0D2Q8N8Y2 350 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 WFDC5Q8TCV5 224 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 WFIKKN2Q8TEU8 576 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 SLC20A1Q8WUM9 679 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 DDX1Q92499 740 aaKnown RBP24.6■■□□□ 1.53
RNF38-208ENST00000488058 MYEOVQ96EZ4 313 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 SLC6A17Q9H1V8 727 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 SLC12A6Q9UHW9 1150 aa24.6■■□□□ 1.53
RNF38-208ENST00000488058 ATP1A3P13637 1013 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 NDUFV2P19404 249 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 CDH5P33151 784 aaPredicted RBP24.59■■□□□ 1.53
RNF38-208ENST00000488058 SOX5P35711 763 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 MPLP40238 635 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 DHPSP49366 369 aaPredicted RBP24.59■■□□□ 1.53
RNF38-208ENST00000488058 NME3Q13232 169 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 BYSLQ13895 437 aaKnown RBP24.59■■□□□ 1.53
RNF38-208ENST00000488058 E2F5Q15329 346 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 RSPO4Q2I0M5 234 aaPredicted RBP24.59■■□□□ 1.53
RNF38-208ENST00000488058 MS4A13Q5J8X5 152 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 MPP7Q5T2T1 576 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 NAA35Q5VZE5 725 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 PMS2CLQ68D20 193 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 KIAA1324Q6UXG2 1013 aaKnown RBP24.59■■□□□ 1.53
RNF38-208ENST00000488058 SLC26A9Q7LBE3 791 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 ZDHHC17Q8IUH5 632 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 CCDC117Q8IWD4 279 aaPredicted RBP24.59■■□□□ 1.53
RNF38-208ENST00000488058 AHI1Q8N157 1196 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 C18orf8Q96DM3 657 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 BTN2A3PQ96KV6 586 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 IRX2Q9BZI1 471 aaPredicted RBP24.59■■□□□ 1.53
RNF38-208ENST00000488058 HSD3B7Q9H2F3 369 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.59■■□□□ 1.53
RNF38-208ENST00000488058 CFAP54Q96N23 3096 aa24.59■■□□□ 1.53
RNF38-208ENST00000488058 ABCA7Q8IZY2 2146 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 NPC1O15118 1278 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 LSM8O95777 96 aaKnown RBP24.58■■□□□ 1.53
RNF38-208ENST00000488058 ABCB4P21439 1286 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 TACR2P21452 398 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 CD70P32970 193 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 STAT1P42224 750 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 JAM2P57087 298 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 FNDC3BQ53EP0 1204 aaKnown RBP24.58■■□□□ 1.53
RNF38-208ENST00000488058 C2CD6Q53TS8 623 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 FAM102AQ5T9C2 384 aaPredicted RBP24.58■■□□□ 1.53
RNF38-208ENST00000488058 SERPINA13PQ6UXR4 307 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 MSANTD4Q8NCY6 345 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 CYB5D2Q8WUJ1 264 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 CPA5Q8WXQ8 436 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms