RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 FTLP02792 175 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-217ENST00000487825 RHOP08100 348 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 ASNSP08243 561 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 AKR1A1P14550 325 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 CST5P28325 142 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-217ENST00000487825 NDUFV1P49821 464 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 TAP2Q03519 686 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 ITIH3Q06033 890 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 PICALMQ13492 652 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 BRDTQ58F21 947 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-217ENST00000487825 THEMIS2Q5TEJ8 643 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 TAF2Q6P1X5 1199 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 HEATR3Q7Z4Q2 680 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 CATIPQ7Z7H3 387 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 FAM90A1Q86YD7 464 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 ADSSL1Q8N142 457 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 VGLL2Q8N8G2 317 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 PSD4Q8NDX1 1056 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 RGMAQ96B86 450 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 C12orf42Q96LP6 360 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 GLT1D1Q96MS3 346 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 HIPK3Q9H422 1215 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 RLIMQ9NVW2 624 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 ETAA1Q9NY74 926 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 ARPP21Q9UBL0 812 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-217ENST00000487825 LUC7L2Q9Y383 392 aaKnown RBP5.5□□□□□ -1.53
BRCA1-217ENST00000487825 ENTPD2Q9Y5L3 495 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 CLSPNQ9HAW4 1339 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 SALL1Q9NSC2 1324 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 A0A0U1RQG5 324 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-217ENST00000487825 H3BQ06 376 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-217ENST00000487825 DTNBO60941 627 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 ARIH2O95376 493 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 GPD1P21695 349 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 AVPR2P30518 371 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 MAP2K6P52564 334 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 HK3P52790 923 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 NXPH1P58417 271 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 CCDC30Q5VVM6 783 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 USP45Q70EL2 814 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 AMIGO2Q86SJ2 522 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 ABRAQ8N0Z2 381 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 PRR18Q8N4B5 295 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 PHOSPHO2Q8TCD6 241 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 CNPPD1Q9BV87 410 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 PUS3Q9BZE2 481 aaKnown RBP5.49□□□□□ -1.53
BRCA1-217ENST00000487825 TINAGL1Q9GZM7 467 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-217ENST00000487825 GPR35Q9HC97 309 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 KLC4Q9NSK0 619 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 HERC5Q9UII4 1024 aaKnown RBP5.49□□□□□ -1.53
BRCA1-217ENST00000487825 FRMD4BQ9Y2L6 1034 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 SPEGQ15772 3267 aa5.49□□□□□ -1.53
BRCA1-217ENST00000487825 OTOGLQ3ZCN5 2332 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 MYO5AQ9Y4I1 1855 aaKnown RBP5.48□□□□□ -1.53
BRCA1-217ENST00000487825 KIF28PB7ZC32 967 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 TRIAP1O43715 76 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 RBMXL2O75526 392 aaKnown RBP5.48□□□□□ -1.53
BRCA1-217ENST00000487825 PDE8BO95263 885 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 CHEK2O96017 543 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 AHSGP02765 367 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 ASGR1P07306 291 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 POU2F2P09086 479 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 FTH1P19P0C7X4 201 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 ZNF853P0CG23 659 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 NR2F6P10588 404 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 CCL23P55773 120 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 EXOSC10Q01780 885 aaKnown RBP5.48□□□□□ -1.53
BRCA1-217ENST00000487825 RBM20Q5T481 1227 aaKnown RBP5.48□□□□□ -1.53
BRCA1-217ENST00000487825 CATSPERGQ6ZRH7 1159 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 USP37Q86T82 979 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 ZBTB46Q86UZ6 589 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 PPP1R3BQ86XI6 285 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 HERC6Q8IVU3 1022 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 CPA6Q8N4T0 437 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 PCSK9Q8NBP7 692 aaKnown RBP5.48□□□□□ -1.53
BRCA1-217ENST00000487825 LINS1Q8NG48 757 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 PABPC5Q96DU9 382 aaKnown RBP5.48□□□□□ -1.53
BRCA1-217ENST00000487825 HSPBAP1Q96EW2 488 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 HAPLN3Q96S86 360 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 TIMP4Q99727 224 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 MOV10L1Q9BXT6 1211 aaKnown RBP5.48□□□□□ -1.53
BRCA1-217ENST00000487825 CHMP4AQ9BY43 222 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 ACTRT3Q9BYD9 372 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 MRPL46Q9H2W6 279 aaKnown RBP5.48□□□□□ -1.53
BRCA1-217ENST00000487825 WDCPQ9H6R7 721 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 LMBRD1Q9NUN5 540 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 FEZ2Q9UHY8 353 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-217ENST00000487825 RALYQ9UKM9 306 aaKnown RBP5.48□□□□□ -1.53
BRCA1-217ENST00000487825 PCDHA1Q9Y5I3 950 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 KAT6AQ92794 2004 aa5.48□□□□□ -1.53
BRCA1-217ENST00000487825 MYO10Q9HD67 2058 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 ASH1LQ9NR48 2969 aaKnown RBP5.47□□□□□ -1.53
BRCA1-217ENST00000487825 M0QYG6 137 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 SLC16A6O15403 523 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 PROP1O75360 226 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 GNAI2P04899 355 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 ACTN1P12814 892 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 ITGALP20701 1170 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 FGFR2P21802 821 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 PROK1P58294 105 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms