RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ERBB2P04626 1255 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 FYNP06241 537 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 GLI1P08151 1106 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 GABRG2P18507 467 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 DHPSP49366 369 aaPredicted RBP13.38□□□□□ -0.27
CHMP3-208ENST00000486404 COPB1P53618 953 aaKnown RBP13.38□□□□□ -0.27
CHMP3-208ENST00000486404 KCNMA1Q12791 1236 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 CDH18Q13634 790 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 CCDC6Q16204 474 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 RSPO4Q2I0M5 234 aaPredicted RBP13.38□□□□□ -0.27
CHMP3-208ENST00000486404 FNDC3BQ53EP0 1204 aaKnown RBP13.38□□□□□ -0.27
CHMP3-208ENST00000486404 SYPL2Q5VXT5 272 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 PMS2CLQ68D20 193 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 KIAA1324Q6UXG2 1013 aaKnown RBP13.38□□□□□ -0.27
CHMP3-208ENST00000486404 SERPINA13PQ6UXR4 307 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 LPCAT2Q7L5N7 544 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 AHI1Q8N157 1196 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 AOPEPQ8N6M6 819 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 RLN3Q8WXF3 142 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 RMDN1Q96DB5 314 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 P2RY11Q96G91 374 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 PIWIL1Q96J94 861 aaKnown RBP13.38□□□□□ -0.27
CHMP3-208ENST00000486404 SPAG5Q96R06 1193 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 STK33Q9BYT3 514 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 DUSP15Q9H1R2 295 aaPredicted RBP13.38□□□□□ -0.27
CHMP3-208ENST00000486404 ABCB8Q9NUT2 735 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 ASNSD1Q9NWL6 643 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 DDIT4Q9NX09 232 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 STIM2Q9P246 746 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 SLC12A6Q9UHW9 1150 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 GGA2Q9UJY4 613 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 DAAM1Q9Y4D1 1078 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.38□□□□□ -0.27
CHMP3-208ENST00000486404 STON1Q9Y6Q2 735 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 GOLGA6L7A0A1B0GV03 622 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 A0A1W2PQF6 199 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 LGALS16A8MUM7 142 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 LSM8O95777 96 aaKnown RBP13.37□□□□□ -0.27
CHMP3-208ENST00000486404 SLC2A3P11169 496 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 PABPC1P11940 636 aaKnown RBP13.37□□□□□ -0.27
CHMP3-208ENST00000486404 NDUFV2P19404 249 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 ABCB4P21439 1286 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 BCKDHBP21953 392 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 SLC6A4P31645 630 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 P2RY2P41231 377 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 SGSHP51688 502 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 POLR2FP61218 127 aaKnown RBP13.37□□□□□ -0.27
CHMP3-208ENST00000486404 PUM1Q14671 1186 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHMP3-208ENST00000486404 TAF5Q15542 800 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 PTPN20Q4JDL3 420 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 FAM133BQ5BKY9 247 aaKnown RBP13.37□□□□□ -0.27
CHMP3-208ENST00000486404 ZC3H12AQ5D1E8 599 aaKnown RBP13.37□□□□□ -0.27
CHMP3-208ENST00000486404 MPP7Q5T2T1 576 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 PIK3R6Q5UE93 754 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 KIAA1211LQ6NV74 962 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 CAVIN1Q6NZI2 390 aaKnown RBP13.37□□□□□ -0.27
CHMP3-208ENST00000486404 OLFML1Q6UWY5 402 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 CHST9Q7L1S5 443 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 ARMCX6Q7L4S7 300 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 ZDHHC17Q8IUH5 632 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 DEFB106AQ8N104 65 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 ATP6V0D2Q8N8Y2 350 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 NEK11Q8NG66 645 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 OLIG1Q8TAK6 271 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 NETO1Q8TDF5 533 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 AZIN2Q96A70 460 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 BTN2A3PQ96KV6 586 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 PRICKLE1Q96MT3 831 aaPredicted RBP13.37□□□□□ -0.27
CHMP3-208ENST00000486404 SLC2A13Q96QE2 648 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 NAA15Q9BXJ9 866 aaKnown RBP13.37□□□□□ -0.27
CHMP3-208ENST00000486404 NUCKS1Q9H1E3 243 aaKnown RBP13.37□□□□□ -0.27
CHMP3-208ENST00000486404 GANQ9H2C0 597 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 VPS45Q9NRW7 570 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 ELOVL2Q9NXB9 296 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 TMEM63CQ9P1W3 806 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 THAP10Q9P2Z0 257 aaPredicted RBP13.37□□□□□ -0.27
CHMP3-208ENST00000486404 HCN2Q9UL51 889 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 CLEC4EQ9ULY5 219 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 STAP1Q9ULZ2 295 aa13.37□□□□□ -0.27
CHMP3-208ENST00000486404 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.36□□□□□ -0.27
CHMP3-208ENST00000486404 FAM170AA1A519 330 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 F5H5T6 163 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 TIMM44O43615 452 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 ZNF217O75362 1048 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 GFPT2O94808 682 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 EPHX1P07099 455 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 POLR2EP19388 210 aaKnown RBP13.36□□□□□ -0.27
CHMP3-208ENST00000486404 HLA-FP30511 346 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 CCR1P32246 355 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 IL12RB1P42701 662 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 KLK7P49862 253 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 SLC6A3Q01959 620 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 RPL6Q02878 288 aaKnown RBP13.36□□□□□ -0.27
CHMP3-208ENST00000486404 UBXN1Q04323 297 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 NME3Q13232 169 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 ZNF234Q14588 700 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 SYCP1Q15431 976 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 ANO6Q4KMQ2 910 aa13.36□□□□□ -0.27
CHMP3-208ENST00000486404 FAM102AQ5T9C2 384 aaPredicted RBP13.36□□□□□ -0.27
CHMP3-208ENST00000486404 RAP1GAP2Q684P5 730 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms