RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PXNP49023 591 aaPredicted RBP7.29□□□□□ -1.24
VPS50-218ENST00000485994 SLC11A2P49281 568 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 RGS7P49802 495 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 LIMK1P53667 647 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 SEC13P55735 322 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 TBX4P57082 545 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 PRR20EP86478 221 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 PRR20CP86479 221 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 PRR20DP86480 221 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 PRR20BP86481 221 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 PRR20AP86496 221 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 LMNB2Q03252 620 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 KCNJ12Q14500 433 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 C10orf76Q5T2E6 689 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 ACBD5Q5T8D3 534 aaPredicted RBP7.29□□□□□ -1.24
VPS50-218ENST00000485994 DENND1BQ6P3S1 775 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 GJB7Q6PEY0 223 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 PRR23BQ6ZRT6 265 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 ARCQ7LC44 396 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 KBTBD6Q86V97 674 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 ZNF677Q86XU0 584 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 CREBRFQ8IUR6 639 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 SFTPA1Q8IWL2 248 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 CCDC33Q8N5R6 958 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 ALLCQ8N6M5 410 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS50-218ENST00000485994 C1orf131Q8NDD1 294 aaKnown RBP7.29□□□□□ -1.24
VPS50-218ENST00000485994 ZNF397Q8NF99 534 aaPredicted RBP7.29□□□□□ -1.24
VPS50-218ENST00000485994 MDGA1Q8NFP4 955 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 WFIKKN2Q8TEU8 576 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 EDEM1Q92611 657 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 SERPINB11Q96P15 392 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 HHIPQ96QV1 700 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 PARD6AQ9NPB6 346 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 SEMA4GQ9NTN9 838 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 POLR3BQ9NW08 1133 aaPredicted RBP7.29□□□□□ -1.24
VPS50-218ENST00000485994 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS50-218ENST00000485994 ELOVL2Q9NXB9 296 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 RRN3Q9NYV6 651 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 ASCC3Q8N3C0 2202 aaKnown RBP7.28□□□□□ -1.24
VPS50-218ENST00000485994 BCLAF3A2AJT9 711 aaKnown RBP7.28□□□□□ -1.24
VPS50-218ENST00000485994 E5RJQ4 531 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 CALCAP01258 141 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 HMBSP08397 361 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 SLC2A3P11169 496 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 UCHL3P15374 230 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 HOXD9P28356 352 aaPredicted RBP7.28□□□□□ -1.24
VPS50-218ENST00000485994 KDSRQ06136 332 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 SRSF5Q13243 272 aaKnown RBP7.28□□□□□ -1.24
VPS50-218ENST00000485994 DRAP1Q14919 205 aaPredicted RBP7.28□□□□□ -1.24
VPS50-218ENST00000485994 ELF2Q15723 593 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 ARHGAP44Q17R89 818 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 MAP7D1Q3KQU3 841 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 FAM133BQ5BKY9 247 aaKnown RBP7.28□□□□□ -1.24
VPS50-218ENST00000485994 LCE2CQ5TA81 110 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 SYPL2Q5VXT5 272 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 PMS2CLQ68D20 193 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 SASS6Q6UVJ0 657 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 SLC36A4Q6YBV0 504 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 TOGARAM2Q6ZUX3 1019 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 SLC26A9Q7LBE3 791 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 ANKS1BQ7Z6G8 1248 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.28□□□□□ -1.24
VPS50-218ENST00000485994 KDM1BQ8NB78 822 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 TMEM35BQ8NCS4 154 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 FIBINQ8TAL6 211 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 CLEC4CQ8WTT0 213 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 DDI1Q8WTU0 396 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 DDX1Q92499 740 aaKnown RBP7.28□□□□□ -1.24
VPS50-218ENST00000485994 NT5C3BQ969T7 300 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 RMDN1Q96DB5 314 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 PGAP3Q96FM1 320 aaPredicted RBP7.28□□□□□ -1.24
VPS50-218ENST00000485994 PPP1R13BQ96KQ4 1090 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 LMLNQ96KR4 655 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 FCRL2Q96LA5 508 aaPredicted RBP7.28□□□□□ -1.24
VPS50-218ENST00000485994 NOX5Q96PH1 765 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 SLC2A13Q96QE2 648 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 HINFPQ9BQA5 517 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 RTKNQ9BST9 563 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 MIS12Q9H081 205 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 ACP6Q9NPH0 428 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 NPDC1Q9NQX5 325 aaPredicted RBP7.28□□□□□ -1.24
VPS50-218ENST00000485994 ST7Q9NRC1 585 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 VPS45Q9NRW7 570 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 FANCLQ9NW38 375 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 PLK2Q9NYY3 685 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 LIMA1Q9UHB6 759 aaKnown RBP7.28□□□□□ -1.24
VPS50-218ENST00000485994 SLC12A6Q9UHW9 1150 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 NAALADL1Q9UQQ1 740 aa7.28□□□□□ -1.24
VPS50-218ENST00000485994 TPRP12270 2363 aaKnown RBP7.28□□□□□ -1.24
VPS50-218ENST00000485994 DNAH14Q0VDD8 3507 aa7.27□□□□□ -1.25
VPS50-218ENST00000485994 KCNU1A8MYU2 1149 aa7.27□□□□□ -1.25
VPS50-218ENST00000485994 CAPN9O14815 690 aa7.27□□□□□ -1.25
VPS50-218ENST00000485994 TM4SF5O14894 197 aa7.27□□□□□ -1.25
VPS50-218ENST00000485994 ZBTB24O43167 697 aaPredicted RBP7.27□□□□□ -1.25
VPS50-218ENST00000485994 HSF2BPO75031 334 aa7.27□□□□□ -1.25
VPS50-218ENST00000485994 LSM8O95777 96 aaKnown RBP7.27□□□□□ -1.25
VPS50-218ENST00000485994 TRUB2O95900 331 aaKnown RBP7.27□□□□□ -1.25
VPS50-218ENST00000485994 TPM2P07951 284 aa7.27□□□□□ -1.25
VPS50-218ENST00000485994 HOXB2P14652 356 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms