RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	DCLK3	Q9C098	648 aa		13.16	□□□□□ -0.3
HDAC7-223	ENST00000485796	WDCP	Q9H6R7	721 aa		13.16	□□□□□ -0.3
HDAC7-223	ENST00000485796	BRD9	Q9H8M2	597 aa		13.16	□□□□□ -0.3
HDAC7-223	ENST00000485796	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
HDAC7-223	ENST00000485796	STOML2	Q9UJZ1	356 aa		13.16	□□□□□ -0.3
HDAC7-223	ENST00000485796	LSM7	Q9UK45	103 aa	Known RBP	13.16	□□□□□ -0.3
HDAC7-223	ENST00000485796	CLEC4E	Q9ULY5	219 aa		13.16	□□□□□ -0.3
HDAC7-223	ENST00000485796	SHISA7	A6NL88	538 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	FAM72C	H0Y354	149 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	BUB1B	O60566	1050 aa	Predicted RBP	13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	APOE	P02649	317 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	TACR2	P21452	398 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	ADRA1B	P35368	520 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	HADHB	P55084	474 aa	Known RBP	13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	DHCR24	Q15392	516 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	IFI16	Q16666	785 aa	Known RBP	13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	ATP13A4	Q4VNC1	1196 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	LY6G5C	Q5SRR4	150 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	FAM72A	Q5TYM5	149 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	FAM72D	Q6L9T8	149 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	FAM72B	Q86X60	149 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	UNC45B	Q8IWX7	931 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	REXO1L1P	Q8IX06	675 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	FAM217A	Q8IXS0	508 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	TPCN2	Q8NHX9	752 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	IGSF8	Q969P0	613 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	AZIN2	Q96A70	460 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	SIK2	Q9H0K1	926 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	ECT2	Q9H8V3	914 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	THG1L	Q9NWX6	298 aa	Known RBP	13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	PLK2	Q9NYY3	685 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	LCMT1	Q9UIC8	334 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	DUSP12	Q9UNI6	340 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	TRIO	O75962	3097 aa		13.15	□□□□□ -0.3
HDAC7-223	ENST00000485796	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	ANTXRL	A6NF34	631 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	TRIM24	O15164	1050 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	SLC34A2	O95436	690 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	SRF	P11831	508 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	SLC6A11	P48066	632 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	SLC25A11	Q02978	314 aa	Known RBP	13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	MESP2	Q0VG99	397 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	RUNX3	Q13761	415 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	AUH	Q13825	339 aa	Known RBP	13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	ACAP1	Q15027	740 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	PDGFRL	Q15198	375 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	HS1BP3	Q53T59	392 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	KCNT1	Q5JUK3	1230 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	BRMS1L	Q5PSV4	323 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	ADGRF1	Q5T601	910 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	FBXL22	Q6P050	247 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	ZNF662	Q6ZS27	426 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	DAAM2	Q86T65	1068 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	C12orf40	Q86WS4	652 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	CIR1	Q86X95	450 aa	Predicted RBP	13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	ZNF683	Q8IZ20	524 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	LGI2	Q8N0V4	545 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	CCAR2	Q8N163	923 aa	Known RBP	13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	CFAP52	Q8N1V2	620 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	RNF10	Q8N5U6	811 aa	Known RBP	13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	NIPA2	Q8N8Q9	360 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	ATP6V0D2	Q8N8Y2	350 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	IRF7	Q92985	503 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	BTN2A3P	Q96KV6	586 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	CALR3	Q96L12	384 aa	Known RBP	13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	ZWILCH	Q9H900	591 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	SLC2A4RG	Q9NR83	387 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	SPHK2	Q9NRA0	654 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	HEBP1	Q9NRV9	189 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	FZD10	Q9ULW2	581 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	SORCS3	Q9UPU3	1222 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	ZNF510	Q9Y2H8	683 aa		13.14	□□□□□ -0.31
HDAC7-223	ENST00000485796	GRID2IP	A4D2P6	1211 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	USP27X	A6NNY8	438 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	PALM	O75781	387 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	CNTN5	O94779	1100 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	SLC2A3	P11169	496 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	TNNT1	P13805	278 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	COMT	P21964	271 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	GJA4	P35212	333 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	PCK1	P35558	622 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	DEK	P35659	375 aa	Known RBP	13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	SLC11A2	P49281	568 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	MLLT6	P55198	1093 aa	Predicted RBP	13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	RPS24	P62847	133 aa	Known RBP	13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	SMTNL2	Q2TAL5	461 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	FYB2	Q5VWT5	728 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	ASTL	Q6HA08	431 aa	Predicted RBP	13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	TXNDC11	Q6PKC3	985 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	SLFN11	Q7Z7L1	901 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	CHSY1	Q86X52	802 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	KIAA1958	Q8N8K9	716 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	NAT16	Q8N8M0	369 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	NTAN1	Q96AB6	310 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	KCTD15	Q96SI1	283 aa	Predicted RBP	13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	NCAPG	Q9BPX3	1015 aa		13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	SNRNP25	Q9BV90	132 aa	Known RBP	13.13	□□□□□ -0.31
HDAC7-223	ENST00000485796	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms