RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 CALCOCO1Q9P1Z2 691 aa18.45■□□□□ 0.54
SREBF1-213ENST00000485080 KRT3P12035 628 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 SKILP12757 684 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 TDGF1P13385 188 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 HOXD9P28356 352 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-213ENST00000485080 SLC6A4P31645 630 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 PTPN9P43378 593 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 KIR2DL1P43626 348 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-213ENST00000485080 CXCL12P48061 93 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 MS4A13Q5J8X5 152 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 PPP1R15BQ5SWA1 713 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 DDI1Q8WTU0 396 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 CPLX3Q8WVH0 158 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 DNAJC7Q99615 494 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 PRMT1Q99873 361 aaKnown RBP18.44■□□□□ 0.54
SREBF1-213ENST00000485080 METTL5Q9NRN9 209 aaKnown RBP18.44■□□□□ 0.54
SREBF1-213ENST00000485080 PIGVQ9NUD9 493 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 ARHGEF38Q9NXL2 777 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 TAS2R14Q9NYV8 317 aa18.44■□□□□ 0.54
SREBF1-213ENST00000485080 TBC1D3BA6NDS4 549 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 AP5Z1O43299 807 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 RTN2O75298 545 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 ABCB4P21439 1286 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 DGKGP49619 791 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 SULT1E1P49888 294 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 SND1Q7KZF4 910 aaKnown RBP eCLIP18.43■□□□□ 0.546e-7■■■□□ 17.6
SREBF1-213ENST00000485080 SYT13Q7L8C5 426 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 VPS36Q86VN1 386 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 GAS2L3Q86XJ1 694 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 HJURPQ8NCD3 748 aaPredicted RBP18.43■□□□□ 0.54
SREBF1-213ENST00000485080 OR8K1Q8NGG5 319 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 CENPIQ92674 756 aaPredicted RBP18.43■□□□□ 0.54
SREBF1-213ENST00000485080 ACDQ96AP0 544 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 TBCBQ99426 244 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 ISCUQ9H1K1 167 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 PLK2Q9NYY3 685 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 RAPGEFL1Q9UHV5 662 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 WDR87Q6ZQQ6 2873 aa18.43■□□□□ 0.54
SREBF1-213ENST00000485080 RIF1Q5UIP0 2472 aaKnown RBP18.42■□□□□ 0.54
SREBF1-213ENST00000485080 GOLGA6L7A0A1B0GV03 622 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 TRIM24O15164 1050 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 FTLP02792 175 aaPredicted RBP18.42■□□□□ 0.54
SREBF1-213ENST00000485080 SP9P0CG40 484 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 PDGFRAP16234 1089 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 TFE3P19532 575 aaPredicted RBP18.42■□□□□ 0.54
SREBF1-213ENST00000485080 SDC4P31431 198 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 RDXP35241 583 aaKnown RBP18.42■□□□□ 0.54
SREBF1-213ENST00000485080 RFC1P35251 1148 aaPredicted RBP18.42■□□□□ 0.54
SREBF1-213ENST00000485080 DEUP1Q05D60 604 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 TBX2Q13207 712 aaPredicted RBP18.42■□□□□ 0.54
SREBF1-213ENST00000485080 NME3Q13232 169 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 C5orf22Q49AR2 442 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 PLEKHA7Q6IQ23 1121 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 RFWD3Q6PCD5 774 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 STRADAQ7RTN6 431 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 KIAA0907Q7Z7F0 614 aaPredicted RBP18.42■□□□□ 0.54
SREBF1-213ENST00000485080 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.42■□□□□ 0.543e-12■■■■□ 25.2
SREBF1-213ENST00000485080 RXFP2Q8WXD0 754 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 RNF34Q969K3 372 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 C1orf74Q96LT6 269 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 SELENOOQ9BVL4 669 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 WDCPQ9H6R7 721 aa18.42■□□□□ 0.54
SREBF1-213ENST00000485080 XPO7Q9UIA9 1087 aaKnown RBP18.42■□□□□ 0.54
SREBF1-213ENST00000485080 FANCMQ8IYD8 2048 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 K7ESF4 209 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 TSPAN3O60637 253 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 MOCS2O96007 188 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-213ENST00000485080 TPM1P09493 284 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 MYBL1P10243 752 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 TACR2P21452 398 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 RRM1P23921 792 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 SATB1Q01826 763 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 KDSRQ06136 332 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 EIF4HQ15056 248 aaKnown RBP18.41■□□□□ 0.54
SREBF1-213ENST00000485080 E2F5Q15329 346 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 CCDC14Q49A88 953 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 TDRD12Q587J7 1177 aaKnown RBP18.41■□□□□ 0.54
SREBF1-213ENST00000485080 TTC39BQ5VTQ0 682 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-213ENST00000485080 DNAJC24Q6P3W2 148 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 PKN3Q6P5Z2 889 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 WDR59Q6PJI9 974 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 SFTPA1Q8IWL2 248 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 EMC1Q8N766 993 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 RPLP0P6Q8NHW5 317 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 JOSD2Q8TAC2 188 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 BHMTQ93088 406 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 TRIM11Q96F44 468 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 CFAP57Q96MR6 1250 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 PRICKLE1Q96MT3 831 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-213ENST00000485080 HAPLN3Q96S86 360 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 TRIM5Q9C035 493 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 PARVAQ9NVD7 372 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 ARHGAP20Q9P2F6 1191 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 ADAMTS1Q9UHI8 967 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 CLEC4EQ9ULY5 219 aa18.41■□□□□ 0.54
SREBF1-213ENST00000485080 SYNJ2BP-COX16A0A087WUM0 186 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 CCDC163A0A0D9SF12 145 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 TYW5A2RUC4 315 aaKnown RBP18.4■□□□□ 0.54
SREBF1-213ENST00000485080 PRRT4C9JH25 899 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 H0Y858 1186 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms