RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, human

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XPA-203	ENST00000485042	SOCS4	Q8WXH5	440 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	RFFL	Q8WZ73	363 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	LPIN2	Q92539	896 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	EDA	Q92838	391 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	KTI12	Q96EK9	354 aa	Predicted RBP	4.88	□□□□□ -1.63
XPA-203	ENST00000485042	PTCD3	Q96EY7	689 aa	Known RBP	4.88	□□□□□ -1.63
XPA-203	ENST00000485042	FAR2	Q96K12	515 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	BARD1	Q99728	777 aa	Known RBP	4.88	□□□□□ -1.63
XPA-203	ENST00000485042	PAAF1	Q9BRP4	392 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	AGXT2	Q9BYV1	514 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	ZCCHC4	Q9H5U6	513 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	ACAD9	Q9H845	621 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	PLEKHA5	Q9HAU0	1116 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	PLEKHA2	Q9HB19	425 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	TRIM36	Q9NQ86	728 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	RAPGEFL1	Q9UHV5	662 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	CCNL1	Q9UK58	526 aa	Predicted RBP	4.88	□□□□□ -1.63
XPA-203	ENST00000485042	ZBTB1	Q9Y2K1	713 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	PCDHA10	Q9Y5I2	948 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	FAM135B	Q49AJ0	1406 aa		4.88	□□□□□ -1.63
XPA-203	ENST00000485042	MAST1	Q9Y2H9	1570 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	CROCC2	H7BZ55	1655 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TET3	O43151	1660 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	KDM5A	P29375	1690 aa	Known RBP	4.87	□□□□□ -1.63
XPA-203	ENST00000485042	GCC2	Q8IWJ2	1684 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TBC1D3D	A0A087WVF3	549 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TBC1D3I	A0A087WXS9	549 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TBC1D3E	A0A087X179	549 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TBC1D3K	A0A087X1G2	549 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042		A0A1W2PPH5	198 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TBC1D3B	A6NDS4	549 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.87	□□□□□ -1.63
XPA-203	ENST00000485042	UNC119B	A6NIH7	251 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	AGAP5	A6NIR3	686 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	SAC3D1	A6NKF1	404 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TBC1D3L	B9A6J9	549 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042		M0QYT0	321 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	RTN3	O95197	1032 aa	Predicted RBP	4.87	□□□□□ -1.63
XPA-203	ENST00000485042	FES	P07332	822 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	RHO	P08100	348 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	CYP21A2	P08686	494 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TBC1D3H	P0C7X1	549 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TSPY4	P0CV99	314 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TSPY10	P0CW01	314 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	ALAD	P13716	330 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	CREB1	P16220	341 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	NXPH1	P58417	271 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	RBM6	P78332	1123 aa	Known RBP	4.87	□□□□□ -1.63
XPA-203	ENST00000485042	IRX6	P78412	446 aa	Predicted RBP	4.87	□□□□□ -1.63
XPA-203	ENST00000485042	KRTAP1-1	Q07627	177 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	GALNT2	Q10471	571 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TOB2	Q14106	344 aa	Predicted RBP	4.87	□□□□□ -1.63
XPA-203	ENST00000485042	KRT32	Q14532	448 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	NFIX	Q14938	502 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	GPR68	Q15743	365 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TBCC	Q15814	346 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	AAK1	Q2M2I8	961 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	LRRC24	Q50LG9	513 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	WDR45B	Q5MNZ6	344 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TEDDM1	Q5T9Z0	273 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	FAM90A2P	Q658T7	463 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	HAUS3	Q68CZ6	603 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TBC1D3G	Q6DHY5	549 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TBC1D3C	Q6IPX1	549 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	GRHL2	Q6ISB3	625 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TTLL10	Q6ZVT0	673 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.87	□□□□□ -1.63
XPA-203	ENST00000485042	LINS1	Q8NG48	757 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	SSH3	Q8TE77	659 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	CENPI	Q92674	756 aa	Predicted RBP	4.87	□□□□□ -1.63
XPA-203	ENST00000485042	FKBP10	Q96AY3	582 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	RNF125	Q96EQ8	232 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	C7orf26	Q96N11	449 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	PIGS	Q96S52	555 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	CHCHD6	Q9BRQ6	235 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	DEF6	Q9H4E7	631 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TBCCD1	Q9NVR7	557 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	ORC3	Q9UBD5	711 aa	Predicted RBP	4.87	□□□□□ -1.63
XPA-203	ENST00000485042	NRBP1	Q9UHY1	535 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	TRPC5	Q9UL62	973 aa	Predicted RBP	4.87	□□□□□ -1.63
XPA-203	ENST00000485042	HSF4	Q9ULV5	492 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	LAS1L	Q9Y4W2	734 aa	Known RBP	4.87	□□□□□ -1.63
XPA-203	ENST00000485042	CYP46A1	Q9Y6A2	500 aa		4.87	□□□□□ -1.63
XPA-203	ENST00000485042	SHPRH	Q149N8	1683 aa		4.86	□□□□□ -1.63
XPA-203	ENST00000485042	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	4.86	□□□□□ -1.63
XPA-203	ENST00000485042		A0A087X0M5	115 aa		4.86	□□□□□ -1.63
XPA-203	ENST00000485042	LOC105369274	A0A096LPK9	316 aa		4.86	□□□□□ -1.63
XPA-203	ENST00000485042	LOC102723532	A0A0G2JNH3	316 aa		4.86	□□□□□ -1.63
XPA-203	ENST00000485042		A0A1B0GX30	115 aa		4.86	□□□□□ -1.63
XPA-203	ENST00000485042	GXYLT2	A0PJZ3	443 aa		4.86	□□□□□ -1.63
XPA-203	ENST00000485042	ANKRD18B	A2A2Z9	1011 aa		4.86	□□□□□ -1.63
XPA-203	ENST00000485042		A8MVJ9	347 aa		4.86	□□□□□ -1.63
XPA-203	ENST00000485042	PEX12	O00623	359 aa		4.86	□□□□□ -1.63
XPA-203	ENST00000485042	HNRNPR	O43390	633 aa	Known RBP	4.86	□□□□□ -1.63
XPA-203	ENST00000485042	ANP32C	O43423	234 aa		4.86	□□□□□ -1.63
XPA-203	ENST00000485042	TIMM44	O43615	452 aa		4.86	□□□□□ -1.63
XPA-203	ENST00000485042	HEXIM1	O94992	359 aa	Known RBP	4.86	□□□□□ -1.63
XPA-203	ENST00000485042	PEPD	P12955	493 aa		4.86	□□□□□ -1.63
XPA-203	ENST00000485042	ZNF37A	P17032	561 aa	Predicted RBP	4.86	□□□□□ -1.63
XPA-203	ENST00000485042	MMP8	P22894	467 aa		4.86	□□□□□ -1.63

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