RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SEMA4GQ9NTN9 838 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 ASNSD1Q9NWL6 643 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 ELOVL2Q9NXB9 296 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 THAP10Q9P2Z0 257 aaPredicted RBP13.4□□□□□ -0.26
HDAC1-209ENST00000484305 XPO7Q9UIA9 1087 aaKnown RBP13.4□□□□□ -0.26
HDAC1-209ENST00000484305 SIK3Q9Y2K2 1263 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 CEP83Q9Y592 693 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.4□□□□□ -0.26
HDAC1-209ENST00000484305 DCHS1Q96JQ0 3298 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 CKAP5Q14008 2032 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 TBL1XO60907 577 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 RHOBTB1O94844 696 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 MOCS2O96007 188 aaPredicted RBP13.39□□□□□ -0.27
HDAC1-209ENST00000484305 GLI1P08151 1106 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 MMEP08473 750 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 ATXN8OSP0DMR3 200 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 CDK11BP21127 795 aaKnown RBP13.39□□□□□ -0.27
HDAC1-209ENST00000484305 P2RY2P41231 377 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 IL12RB1P42701 662 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 ID4P47928 161 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 JAM2P57087 298 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 SLC6A3Q01959 620 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 ENPP2Q13822 863 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 SYCP1Q15431 976 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 ELF2Q15723 593 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 CSRP2Q16527 193 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 ANO6Q4KMQ2 910 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 MPP7Q5T2T1 576 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 PMS2CLQ68D20 193 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 RNF43Q68DV7 783 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 PRICKLE1Q96MT3 831 aaPredicted RBP13.39□□□□□ -0.27
HDAC1-209ENST00000484305 CIPCQ9C0C6 399 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 NUCKS1Q9H1E3 243 aaKnown RBP13.39□□□□□ -0.27
HDAC1-209ENST00000484305 SLC6A17Q9H1V8 727 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 SYNCQ9H7C4 482 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 ABCB8Q9NUT2 735 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 STIM2Q9P246 746 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 MBD1Q9UIS9 605 aaPredicted RBP13.39□□□□□ -0.27
HDAC1-209ENST00000484305 STON1Q9Y6Q2 735 aa13.39□□□□□ -0.27
HDAC1-209ENST00000484305 MUC22E2RYF6 1773 aaPredicted RBP13.38□□□□□ -0.27
HDAC1-209ENST00000484305 GON4LQ3T8J9 2241 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 SYNJ2BP-COX16A0A087WUM0 186 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 LGALS16A8MUM7 142 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 HSF2BPO75031 334 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 GFPT2O94808 682 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 ATP1A3P13637 1013 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 NDUFV2P19404 249 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 GABRB2P47870 512 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 SNX16P57768 344 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 RPS24P62847 133 aaKnown RBP13.38□□□□□ -0.27
HDAC1-209ENST00000484305 CDK17Q00537 523 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 UBXN1Q04323 297 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 ZNF234Q14588 700 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 EIF4HQ15056 248 aaKnown RBP13.38□□□□□ -0.27
HDAC1-209ENST00000484305 RSPO4Q2I0M5 234 aaPredicted RBP13.38□□□□□ -0.27
HDAC1-209ENST00000484305 MAP7D1Q3KQU3 841 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 MS4A13Q5J8X5 152 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 PRR23CQ6ZRP0 262 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 SLC26A9Q7LBE3 791 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 KIAA0907Q7Z7F0 614 aaPredicted RBP13.38□□□□□ -0.27
HDAC1-209ENST00000484305 HJURPQ8NCD3 748 aaPredicted RBP13.38□□□□□ -0.27
HDAC1-209ENST00000484305 TMEM35BQ8NCS4 154 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 ANKRD20A12PQ8NF67 263 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 EPS8L1Q8TE68 723 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 SLC20A1Q8WUM9 679 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 UCMAQ8WVF2 138 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 DDX50Q9BQ39 737 aaKnown RBP13.38□□□□□ -0.27
HDAC1-209ENST00000484305 IRX2Q9BZI1 471 aaPredicted RBP13.38□□□□□ -0.27
HDAC1-209ENST00000484305 SMOC1Q9H4F8 434 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 FAM204AQ9H8W3 233 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 DDIT4Q9NX09 232 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 COX16Q9P0S2 106 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 CALCOCO1Q9P1Z2 691 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 GGA2Q9UJY4 613 aa13.38□□□□□ -0.27
HDAC1-209ENST00000484305 TNRC6BQ9UPQ9 1833 aaKnown RBP13.38□□□□□ -0.27
HDAC1-209ENST00000484305 KCNU1A8MYU2 1149 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 NPC1O15118 1278 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 TIMM44O43615 452 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 APOEP02649 317 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 ZNF806P0C7X5 589 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 PABPC1P11940 636 aaKnown RBP13.37□□□□□ -0.27
HDAC1-209ENST00000484305 TACR2P21452 398 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 CD70P32970 193 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 SOX5P35711 763 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 MPLP40238 635 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 LMNB2Q03252 620 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 SF3A2Q15428 464 aaKnown RBP13.37□□□□□ -0.27
HDAC1-209ENST00000484305 FUT11Q495W5 492 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 C2CD6Q53TS8 623 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 PLA2G2CQ5R387 149 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 RAP1GAP2Q684P5 730 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 CHST9Q7L1S5 443 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 ADIPOR2Q86V24 386 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 C11orf74Q86VG3 221 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 ERICH1Q86X53 443 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 MFN1Q8IWA4 741 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 DHX40Q8IX18 779 aaKnown RBP13.37□□□□□ -0.27
HDAC1-209ENST00000484305 LGI2Q8N0V4 545 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 CFAP52Q8N1V2 620 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms