RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 PDGFRAP16234 1089 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 COL9A1P20849 921 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 RDXP35241 583 aaKnown RBP16.18■□□□□ 0.18
RPP40-206ENST00000483546 SLC6A11P48066 632 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 PTPN5P54829 565 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 MRPS21P82921 87 aaKnown RBP16.18■□□□□ 0.18
RPP40-206ENST00000483546 MTAPQ13126 283 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 TBX2Q13207 712 aaPredicted RBP16.18■□□□□ 0.18
RPP40-206ENST00000483546 MS4A13Q5J8X5 152 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 TTC39BQ5VTQ0 682 aaPredicted RBP16.18■□□□□ 0.18
RPP40-206ENST00000483546 OTUD1Q5VV17 481 aaPredicted RBP16.18■□□□□ 0.18
RPP40-206ENST00000483546 NADSYN1Q6IA69 706 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 NAT16Q8N8M0 369 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 TBCBQ99426 244 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 WDCPQ9H6R7 721 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 RBM12Q9NTZ6 932 aaKnown RBP16.18■□□□□ 0.18
RPP40-206ENST00000483546 PIGVQ9NUD9 493 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 ABHD10Q9NUJ1 306 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 ARHGEF38Q9NXL2 777 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 TAS2R14Q9NYV8 317 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 ADAMTS1Q9UHI8 967 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 ATG2BQ96BY7 2078 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 SYNJ2BP-COX16A0A087WUM0 186 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 TBC1D3BA6NDS4 549 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 F5H5T6 163 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 K7EQS6 105 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 AP5Z1O43299 807 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 RNF40O75150 1001 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 MOCS2O96007 188 aaPredicted RBP16.17■□□□□ 0.18
RPP40-206ENST00000483546 FTLP02792 175 aaPredicted RBP16.17■□□□□ 0.18
RPP40-206ENST00000483546 GPD1P21695 349 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 RRM1P23921 792 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 HOXD9P28356 352 aaPredicted RBP16.17■□□□□ 0.18
RPP40-206ENST00000483546 SLC6A4P31645 630 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 RFC1P35251 1148 aaPredicted RBP16.17■□□□□ 0.18
RPP40-206ENST00000483546 ZNF75DP51815 510 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 KDSRQ06136 332 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 ANGPT1Q15389 498 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 ZNF528Q3MIS6 628 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 PPP1R15BQ5SWA1 713 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 NAIF1Q69YI7 327 aaPredicted RBP16.17■□□□□ 0.18
RPP40-206ENST00000483546 PLEKHA7Q6IQ23 1121 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 TRNP1Q6NT89 227 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 DCUN1D2Q6PH85 259 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 TMC6Q7Z403 805 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 TRMT11Q7Z4G4 463 aaKnown RBP16.17■□□□□ 0.18
RPP40-206ENST00000483546 CHSY1Q86X52 802 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 CCDC117Q8IWD4 279 aaPredicted RBP16.17■□□□□ 0.18
RPP40-206ENST00000483546 EMC1Q8N766 993 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 RXFP2Q8WXD0 754 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 EZH1Q92800 747 aaPredicted RBP16.17■□□□□ 0.18
RPP40-206ENST00000483546 CFAP57Q96MR6 1250 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.17■□□□□ 0.18
RPP40-206ENST00000483546 FAM126AQ9BYI3 521 aaPredicted RBP16.17■□□□□ 0.18
RPP40-206ENST00000483546 MRPL47Q9HD33 250 aaKnown RBP16.17■□□□□ 0.18
RPP40-206ENST00000483546 PRMT8Q9NR22 394 aaPredicted RBP16.17■□□□□ 0.18
RPP40-206ENST00000483546 PLK2Q9NYY3 685 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 COX16Q9P0S2 106 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 ARHGAP20Q9P2F6 1191 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 STARD13Q9Y3M8 1113 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 SCINQ9Y6U3 715 aa16.17■□□□□ 0.18
RPP40-206ENST00000483546 MYO18AQ92614 2054 aaKnown RBP16.17■□□□□ 0.18
RPP40-206ENST00000483546 TMCO5BA8MYB1 307 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 AKR1B15C9JRZ8 316 aaPredicted RBP16.16■□□□□ 0.18
RPP40-206ENST00000483546 NPC1O15118 1278 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 CISD3P0C7P0 127 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 TACR2P21452 398 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 CXCL12P48061 93 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 ZNF143P52747 638 aaPredicted RBP16.16■□□□□ 0.18
RPP40-206ENST00000483546 EIF4HQ15056 248 aaKnown RBP16.16■□□□□ 0.18
RPP40-206ENST00000483546 ARL13BQ3SXY8 428 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 CCDC14Q49A88 953 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 RABGAP1LQ5R372 815 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 WDR59Q6PJI9 974 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 Q6ZS52 159 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 ANKS1BQ7Z6G8 1248 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 JOSD2Q8TAC2 188 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 WFIKKN2Q8TEU8 576 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 USP33Q8TEY7 942 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 FNIP1Q8TF40 1166 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 CENPIQ92674 756 aaPredicted RBP16.16■□□□□ 0.18
RPP40-206ENST00000483546 BHMTQ93088 406 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 C1orf74Q96LT6 269 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 HAPLN3Q96S86 360 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 PRMT1Q99873 361 aaKnown RBP16.16■□□□□ 0.18
RPP40-206ENST00000483546 TKTL2Q9H0I9 626 aa16.16■□□□□ 0.18
RPP40-206ENST00000483546 MUC6Q6W4X9 2439 aa16.15■□□□□ 0.18
RPP40-206ENST00000483546 FAM170AA1A519 330 aa16.15■□□□□ 0.18
RPP40-206ENST00000483546 TIMM44O43615 452 aa16.15■□□□□ 0.18
RPP40-206ENST00000483546 TSPAN3O60637 253 aa16.15■□□□□ 0.18
RPP40-206ENST00000483546 PAGE1O75459 146 aa16.15■□□□□ 0.18
RPP40-206ENST00000483546 PLEKP08567 350 aaPredicted RBP16.15■□□□□ 0.18
RPP40-206ENST00000483546 AIF1P55008 147 aa16.15■□□□□ 0.18
RPP40-206ENST00000483546 ATP11AP98196 1134 aa16.15■□□□□ 0.18
RPP40-206ENST00000483546 MAMLD1Q13495 774 aa16.15■□□□□ 0.18
RPP40-206ENST00000483546 GAS6Q14393 721 aa16.15■□□□□ 0.18
RPP40-206ENST00000483546 SLC18A3Q16572 532 aa16.15■□□□□ 0.18
RPP40-206ENST00000483546 C10orf76Q5T2E6 689 aa16.15■□□□□ 0.18
RPP40-206ENST00000483546 RAP1GAP2Q684P5 730 aa16.15■□□□□ 0.18
RPP40-206ENST00000483546 ALKBH5Q6P6C2 394 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms