RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 JMJD4Q9H9V9 463 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 C1orf112Q9NSG2 853 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 ECHDC1Q9NTX5 307 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 TCP11L1Q9NUJ3 509 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 FANCLQ9NW38 375 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 TMEM161AQ9NX61 479 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 MAP3K20Q9NYL2 800 aaKnown RBP4.02□□□□□ -1.77
LRCH3-217ENST00000483442 ERAP1Q9NZ08 941 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 DKK2Q9UBU2 259 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.02□□□□□ -1.77
LRCH3-217ENST00000483442 PLXNA4Q9HCM2 1894 aa4.02□□□□□ -1.77
LRCH3-217ENST00000483442 SRRM3A6NNA2 597 aaPredicted RBP4.01□□□□□ -1.77
LRCH3-217ENST00000483442 ZNF891A8MT65 544 aaPredicted RBP4.01□□□□□ -1.77
LRCH3-217ENST00000483442 FIBPO43427 364 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 ATP9AO75110 1047 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 HMMRO75330 724 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 FSBPO95073 299 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 RETP07949 1114 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 SPATA31D3P0C874 917 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 CTSAP10619 480 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 LAMP2P13473 410 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 KLRC1P26715 233 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 HAND2P61296 217 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 MRPL49Q13405 166 aaKnown RBP4.01□□□□□ -1.77
LRCH3-217ENST00000483442 GIT2Q14161 759 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 WTAPQ15007 396 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 PLCB4Q15147 1175 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 C21orf62-AS1Q17RA5 79 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 CCDC142Q17RM4 750 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 AASDHQ4L235 1098 aaPredicted RBP4.01□□□□□ -1.77
LRCH3-217ENST00000483442 ODR4Q5SWX8 454 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 VPS53Q5VIR6 699 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 TIGD7Q6NT04 549 aaPredicted RBP4.01□□□□□ -1.77
LRCH3-217ENST00000483442 MTHFD1LQ6UB35 978 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 Q6YL49 198 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 SPATA31D4Q6ZUB0 917 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 PRIMA1Q86XR5 153 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 HOMER1Q86YM7 354 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 CELF5Q8N6W0 485 aaKnown RBP4.01□□□□□ -1.77
LRCH3-217ENST00000483442 OR5M3Q8NGP4 307 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 CHTF18Q8WVB6 975 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 STAMQ92783 540 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 ZNF764Q96H86 408 aaPredicted RBP4.01□□□□□ -1.77
LRCH3-217ENST00000483442 KLHL5Q96PQ7 755 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 NDC1Q9BTX1 674 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 RIOX1Q9H6W3 641 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 ELAC1Q9H777 363 aaKnown RBP4.01□□□□□ -1.77
LRCH3-217ENST00000483442 KAT14Q9H8E8 782 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 SFXN1Q9H9B4 322 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 WDR6Q9NNW5 1121 aaKnown RBP4.01□□□□□ -1.77
LRCH3-217ENST00000483442 INTS7Q9NVH2 962 aaKnown RBP4.01□□□□□ -1.77
LRCH3-217ENST00000483442 ZNHIT2Q9UHR6 403 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 ANAPC4Q9UJX5 808 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 FAM208BQ5VWN6 2430 aa4.01□□□□□ -1.77
LRCH3-217ENST00000483442 SETXQ7Z333 2677 aaKnown RBP4□□□□□ -1.77
LRCH3-217ENST00000483442 SMIM35A0A1B0GVV1 85 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 ZBTB5O15062 677 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 TRIM24O15164 1050 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 NCAM2O15394 837 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 DNAJC6O75061 913 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 ZC3H11AO75152 810 aaKnown RBP eCLIP4□□□□□ -1.77
LRCH3-217ENST00000483442 CDC45O75419 566 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 RFPL2O75678 378 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 NCR1O76036 304 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 SEC24DO94855 1032 aaPredicted RBP4□□□□□ -1.77
LRCH3-217ENST00000483442 KCNK5O95279 499 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 TOP3BO95985 862 aaKnown RBP4□□□□□ -1.77
LRCH3-217ENST00000483442 FGAP02671 866 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 RPLP2P05387 115 aaKnown RBP4□□□□□ -1.77
LRCH3-217ENST00000483442 CNPP09543 421 aaKnown RBP4□□□□□ -1.77
LRCH3-217ENST00000483442 PARP1P09874 1014 aaKnown RBP4□□□□□ -1.77
LRCH3-217ENST00000483442 ZSCAN20P17040 1043 aaPredicted RBP4□□□□□ -1.77
LRCH3-217ENST00000483442 CLCN4P51793 760 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 MTAPQ13126 283 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 SIM2Q14190 667 aaPredicted RBP4□□□□□ -1.77
LRCH3-217ENST00000483442 MLF2Q15773 248 aaPredicted RBP4□□□□□ -1.77
LRCH3-217ENST00000483442 CCDC6Q16204 474 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 LONRF3Q496Y0 759 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 TIGD2Q4W5G0 525 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 SOWAHCQ53LP3 525 aaPredicted RBP4□□□□□ -1.77
LRCH3-217ENST00000483442 CLLU1OSQ5K130 101 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 ANKS6Q68DC2 871 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 C19orf48Q6RUI8 117 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 PARM1Q6UWI2 310 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 C15orf39Q6ZRI6 1047 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 MFSD6Q6ZSS7 791 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 GPRIN1Q7Z2K8 1008 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 TRMT1LQ7Z2T5 733 aaKnown RBP4□□□□□ -1.77
LRCH3-217ENST00000483442 TMEM173Q86WV6 379 aaPredicted RBP4□□□□□ -1.77
LRCH3-217ENST00000483442 DGKHQ86XP1 1220 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 ECHDC2Q86YB7 292 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 KIAA0319LQ8IZA0 1049 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 UNC5BQ8IZJ1 945 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 LRRC43Q8N309 656 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 SAMD3Q8N6K7 520 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 PIBF1Q8WXW3 757 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 SMG7Q92540 1137 aaKnown RBP4□□□□□ -1.77
LRCH3-217ENST00000483442 NELL1Q92832 810 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 MAP4K1Q92918 833 aa4□□□□□ -1.77
LRCH3-217ENST00000483442 TNPO1Q92973 898 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms