RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 SNX17Q15036 470 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 SPDYCQ5MJ68 293 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 RNF43Q68DV7 783 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 EFCAB12Q6NXP0 572 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 VN1R5Q7Z5H4 357 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 SLFN11Q7Z7L1 901 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 KBTBD2Q8IY47 623 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 B3GALNT2Q8NCR0 500 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 GPRASP2Q96D09 838 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 GPRC5CQ9NQ84 441 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 ENTPD7Q9NQZ7 604 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 DDIT4Q9NX09 232 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 CLIC5Q9NZA1 410 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 RAD54BQ9Y620 910 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 COMMD3-BMI1R4GMX3 469 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 RAD51BO15315 384 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 CELF2O95319 508 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 SLC2A4P14672 509 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 PKN1Q16512 942 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 PERM1Q5SV97 790 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 ANKRD13AQ8IZ07 590 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 KRT78Q8N1N4 520 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 SETD9Q8NE22 299 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 TSPAN14Q8NG11 270 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 CKAP2Q8WWK9 683 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 TPD52L3Q96J77 140 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 OLFM1Q99784 485 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 NFKBIL1Q9UBC1 381 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 LIMD1Q9UGP4 676 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 ITGB1BP2Q9UKP3 347 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 EFCAB10A6NFE3 127 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 SNX3O60493 162 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 TNFRSF21O75509 655 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 ATP5BP06576 529 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 TNFRSF8P28908 595 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 CAP2P40123 477 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 SHROOM1Q2M3G4 852 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 TTLL9Q3SXZ7 439 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 UTS2BQ765I0 119 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 MYO1HQ8N1T3 1032 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 ATG4CQ96DT6 458 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 NARS2Q96I59 477 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 NRDE2Q9H7Z3 1164 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 ANKEF1Q9NU02 776 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 EHD3Q9NZN3 535 aa9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 LSM7Q9UK45 103 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 CORO1CQ9ULV4 474 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP2-216ENST00000483412 CCL15-CCL14A0A0B4J2E2 113 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 TADA2AO75478 443 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 NPM3O75607 178 aaKnown RBP9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 AKAP3O75969 853 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 NR3C2P08235 984 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 CYP2C8P10632 490 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 ANPEPP15144 967 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 TSNQ15631 228 aaKnown RBP9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 CCL15Q16663 113 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 NECAB2Q7Z6G3 386 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 EMC1Q8N766 993 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 FNIP1Q8TF40 1166 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 ACOX2Q99424 681 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 NAT9Q9BTE0 207 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 PIH1D1Q9NWS0 290 aaKnown RBP9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 KCNK4Q9NYG8 393 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 CCDC167Q9P0B6 97 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 ZNF624Q9P2J8 865 aaPredicted RBP9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 AP4E1Q9UPM8 1137 aa9.77□□□□□ -0.84
CDK5RAP2-216ENST00000483412 ERI2A8K979 691 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 RPS6KA5O75582 802 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 PCNAP12004 261 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 PURAQ00577 322 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 CXCL9Q07325 125 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 NR6A1Q15406 480 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 NT5DC3Q86UY8 548 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 PLGRKTQ9HBL7 147 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 TRIM39Q9HCM9 518 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 UBP1Q9NZI7 540 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 PLA2G6O60733 806 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 JAK1P23458 1154 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 CYP2F1P24903 491 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 GCLCP48506 637 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 SLC25A3Q00325 362 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 PTAR1Q7Z6K3 402 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 EXOC3L1Q86VI1 746 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 CYP4Z2PQ8N1L4 340 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 ARL10Q8N8L6 244 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 NUDT12Q9BQG2 462 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 KLHL1Q9NR64 748 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 RGS18Q9NS28 235 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 LRRC4BQ9NT99 713 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 PLSCR1O15162 318 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 ENTPD5O75356 428 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 IFNA14P01570 189 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 CETPP11597 493 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 NUMBP49757 651 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 CCNG1P51959 295 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 DGCR6Q14129 220 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 KLHL12Q53G59 568 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 C10orf120Q5SQS8 335 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 ARHGEF19Q8IW93 802 aa9.77□□□□□ -0.85
CDK5RAP2-216ENST00000483412 CD302Q8IX05 232 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms