RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 STRA6Q9BX79 667 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 TPSD1Q9BZJ3 242 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 MTMR12Q9C0I1 747 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 IKZF4Q9H2S9 585 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 PDE11AQ9HCR9 933 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 TMEM9BQ9NQ34 198 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 POLR3BQ9NW08 1133 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-207ENST00000483407 GCNT4Q9P109 453 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 TJP2Q9UDY2 1190 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 RALYQ9UKM9 306 aaKnown RBP6.25□□□□□ -1.41
CSDE1-207ENST00000483407 MMP17Q9ULZ9 603 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 USP24Q9UPU5 2620 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 LNP1A1A4G5 178 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 ZNF233A6NK53 670 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 LEFTY2O00292 366 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 ATP2C2O75185 946 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 PRPF6O94906 941 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 APODP05090 189 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 CEACAM1P13688 526 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 PDCP20941 246 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 CSRP1P21291 193 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 WARSP23381 471 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 BDNFP23560 247 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 OPRD1P41143 372 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 EIF2DP41214 584 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 STAT6P42226 847 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 DPP6P42658 865 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 DHPSP49366 369 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 CASP5P51878 434 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 PSMC1P62191 440 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 SNRPNP63162 240 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 SLC7A9P82251 487 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 MRPS21P82921 87 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 LMAN2Q12907 356 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 BYSLQ13895 437 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 CRY1Q16526 586 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 CCDC142Q17RM4 750 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 PREPLQ4J6C6 727 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 EOGTQ5NDL2 527 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 TDRD10Q5VZ19 366 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 C6orf15Q6UXA7 325 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 UNQ6494/PRO21346Q6UXR6 183 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 USP49Q70CQ1 688 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 LPCAT2Q7L5N7 544 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 RASSF3Q86WH2 238 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 DDX42Q86XP3 938 aaKnown RBP eCLIP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 MRPL41Q8IXM3 137 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 CCDC65Q8IXS2 484 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 LILRB2Q8N423 598 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 CCDC33Q8N5R6 958 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 ZSWIM2Q8NEG5 633 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 MDGA1Q8NFP4 955 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 CXorf38Q8TB03 319 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 MYCBPAPQ8TBZ2 947 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 PIGKQ92643 395 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 EZH1Q92800 747 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 DNAJC19Q96DA6 116 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 SLITRK1Q96PX8 696 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 PNKPQ96T60 521 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 MMS19Q96T76 1030 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 NUSAP1Q9BXS6 441 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 LRRC27Q9C0I9 530 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 MRPL18Q9H0U6 180 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 LINC00597Q9H2U6 94 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 GSX1Q9H4S2 264 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 PCIF1Q9H4Z3 704 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 KIAA1586Q9HCI6 787 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 CYP4F12Q9HCS2 524 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 PANK4Q9NVE7 773 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 INTS13Q9NVM9 706 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 BCCIPQ9P287 314 aaKnown RBP eCLIP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 SIX4Q9UIU6 781 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 FBXO2Q9UK22 296 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 INVSQ9Y283 1065 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 SRPRBQ9Y5M8 271 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 CPQQ9Y646 472 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 CLIC4Q9Y696 253 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 MAST4O15021 2626 aa6.24□□□□□ -1.41
CSDE1-207ENST00000483407 PDCD11Q14690 1871 aaKnown RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 NUP210Q8TEM1 1887 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-207ENST00000483407 FRMD3A2A2Y4 597 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 ANKRD62A6NC57 917 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 TMEM8BA6NDV4 472 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 ZNF840PA6NDX5 716 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 UPK3BL1B0FP48 263 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 UPK3BL2E5RIL1 263 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 F8VP50 259 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 K7EQS6 105 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 PIK3R2O00459 728 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 GNB5O14775 395 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 MSTNO14793 375 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 HCRTO43612 131 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 KAT7O95251 611 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 TIAF1O95411 115 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 KLF8O95600 359 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-207ENST00000483407 CYP17A1P05093 508 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 PDGFRBP09619 1106 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 FAM163BP0C2L3 166 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 BCKDHBP21953 392 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms