RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 CYB5D2Q8WUJ1 264 aa12.56□□□□□ -0.4
HDLBP-239ENST00000483086 DDX1Q92499 740 aaKnown RBP12.56□□□□□ -0.4
HDLBP-239ENST00000483086 FAM149B1Q96BN6 582 aa12.56□□□□□ -0.4
HDLBP-239ENST00000483086 MYO19Q96H55 970 aa12.56□□□□□ -0.4
HDLBP-239ENST00000483086 GANQ9H2C0 597 aa12.56□□□□□ -0.4
HDLBP-239ENST00000483086 FSCN3Q9NQT6 498 aa12.56□□□□□ -0.4
HDLBP-239ENST00000483086 ELOVL2Q9NXB9 296 aa12.56□□□□□ -0.4
HDLBP-239ENST00000483086 BCCIPQ9P287 314 aaKnown RBP eCLIP12.56□□□□□ -0.4
HDLBP-239ENST00000483086 PCDHGA5Q9Y5G8 931 aa12.56□□□□□ -0.4
HDLBP-239ENST00000483086 KNL1Q8NG31 2342 aa12.56□□□□□ -0.4
HDLBP-239ENST00000483086 AKAP13Q12802 2813 aa12.56□□□□□ -0.4
HDLBP-239ENST00000483086 PLXNA2O75051 1894 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 TMEM131Q92545 1883 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 LNP1A1A4G5 178 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 PRR5-ARHGAP8B1AHC4 643 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 I6L893 689 aaPredicted RBP12.55□□□□□ -0.4
HDLBP-239ENST00000483086 IRAK2O43187 625 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 TBL1XO60907 577 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 ALDH1A2O94788 518 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 CAVIN2O95810 425 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 LATS1O95835 1130 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 ITPKAP23677 461 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 ACADSBP45954 432 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 NUMBP49757 651 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 IRAK1P51617 712 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 ARHGAP8P85298 464 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 DRAP1Q14919 205 aaPredicted RBP12.55□□□□□ -0.4
HDLBP-239ENST00000483086 KRT31Q15323 416 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 ELF2Q15723 593 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 TPD52L1Q16890 204 aaPredicted RBP12.55□□□□□ -0.4
HDLBP-239ENST00000483086 MPPE1Q53F39 396 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 C2CD6Q53TS8 623 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 ZC3H12AQ5D1E8 599 aaKnown RBP12.55□□□□□ -0.4
HDLBP-239ENST00000483086 ARTNQ5T4W7 220 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 TRNP1Q6NT89 227 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 OLFML1Q6UWY5 402 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 ERMP1Q7Z2K6 904 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 ANKS1BQ7Z6G8 1248 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 DEFB106AQ8N104 65 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 CFAP52Q8N1V2 620 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 PGBD3Q8N328 593 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.55□□□□□ -0.4
HDLBP-239ENST00000483086 ENOX1Q8TC92 643 aaKnown RBP12.55□□□□□ -0.4
HDLBP-239ENST00000483086 NETO1Q8TDF5 533 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 TMA16Q96EY4 203 aaKnown RBP12.55□□□□□ -0.4
HDLBP-239ENST00000483086 SLC2A13Q96QE2 648 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 LSM14BQ9BX40 385 aaKnown RBP12.55□□□□□ -0.4
HDLBP-239ENST00000483086 MTG2Q9H4K7 406 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 ANLNQ9NQW6 1124 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 ABCB8Q9NUT2 735 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 FANCLQ9NW38 375 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 CDV3Q9UKY7 258 aaKnown RBP12.55□□□□□ -0.4
HDLBP-239ENST00000483086 CYP8B1Q9UNU6 501 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 TLR6Q9Y2C9 796 aa12.55□□□□□ -0.4
HDLBP-239ENST00000483086 CDX4O14627 284 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-239ENST00000483086 MED7O43513 233 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 RHOBTB1O94844 696 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 TRUB2O95900 331 aaKnown RBP12.54□□□□□ -0.4
HDLBP-239ENST00000483086 MOCS2O96007 188 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-239ENST00000483086 CYBBP04839 570 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 UCHL3P15374 230 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 GGCXP38435 758 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 DHPSP49366 369 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-239ENST00000483086 LMAN2Q12907 356 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 RAPGEF1Q13905 1077 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 NCAPHQ15003 741 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 PREPLQ4J6C6 727 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-239ENST00000483086 DCAF6Q58WW2 860 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 MS4A13Q5J8X5 152 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 CHST9Q7L1S5 443 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 BEND5Q7L4P6 421 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 APTXQ7Z2E3 356 aaKnown RBP12.54□□□□□ -0.4
HDLBP-239ENST00000483086 TRMT11Q7Z4G4 463 aaKnown RBP12.54□□□□□ -0.4
HDLBP-239ENST00000483086 NOP9Q86U38 636 aaKnown RBP12.54□□□□□ -0.4
HDLBP-239ENST00000483086 CIR1Q86X95 450 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-239ENST00000483086 CACUL1Q86Y37 369 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 AZIN2Q96A70 460 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 PPP1R13BQ96KQ4 1090 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 SERPINB11Q96P15 392 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 PRMT1Q99873 361 aaKnown RBP12.54□□□□□ -0.4
HDLBP-239ENST00000483086 SLC2A11Q9BYW1 496 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 CIPCQ9C0C6 399 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 VPS16Q9H269 839 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 LHX5Q9H2C1 402 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 TMEM245Q9H330 911 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 POPDC2Q9HBU9 364 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 VPS45Q9NRW7 570 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 TMEM63CQ9P1W3 806 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 STIM2Q9P246 746 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 GGA2Q9UJY4 613 aa12.54□□□□□ -0.4
HDLBP-239ENST00000483086 TPRP12270 2363 aaKnown RBP12.54□□□□□ -0.4
HDLBP-239ENST00000483086 PCNX2A6NKB5 2137 aa12.53□□□□□ -0.4
HDLBP-239ENST00000483086 CEP295Q9C0D2 2601 aa12.53□□□□□ -0.4
HDLBP-239ENST00000483086 CHD5Q8TDI0 1954 aa12.53□□□□□ -0.4
HDLBP-239ENST00000483086 KCNU1A8MYU2 1149 aa12.53□□□□□ -0.4
HDLBP-239ENST00000483086 PABPC1P11940 636 aaKnown RBP12.53□□□□□ -0.4
HDLBP-239ENST00000483086 CYP11B1P15538 503 aa12.53□□□□□ -0.4
HDLBP-239ENST00000483086 CTSOP43234 321 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-239ENST00000483086 YWHAZP63104 245 aaKnown RBP12.53□□□□□ -0.4
HDLBP-239ENST00000483086 IRX4P78413 519 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms