RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 CXCR3P49682 368 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 ZNF528Q3MIS6 628 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 HSF5Q4G112 596 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-214ENST00000482733 MS4A13Q5J8X5 152 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 OTUD1Q5VV17 481 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-214ENST00000482733 NADSYN1Q6IA69 706 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 PHLDB2Q86SQ0 1253 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 OR8K1Q8NGG5 319 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 TRIM11Q96F44 468 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 TBCBQ99426 244 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 WDCPQ9H6R7 721 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 ZNHIT6Q9NWK9 470 aaKnown RBP17.2■□□□□ 0.34
HMGN1-214ENST00000482733 TAS2R14Q9NYV8 317 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 C2CD4BA6NLJ0 364 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 TMCO5BA8MYB1 307 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 ENDOD1O94919 500 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 FTLP02792 175 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-214ENST00000482733 MYBL1P10243 752 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 HOXD9P28356 352 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-214ENST00000482733 SLC6A4P31645 630 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 PTPN9P43378 593 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 ARID5BQ14865 1188 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 E2F5Q15329 346 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 C10orf76Q5T2E6 689 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 RFWD3Q6PCD5 774 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 BNIPLQ7Z465 357 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 TRMT11Q7Z4G4 463 aaKnown RBP17.19■□□□□ 0.34
HMGN1-214ENST00000482733 CHSY1Q86X52 802 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 CCDC117Q8IWD4 279 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-214ENST00000482733 MAML2Q8IZL2 1156 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-214ENST00000482733 EMC1Q8N766 993 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 RPLP0P6Q8NHW5 317 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 USP33Q8TEY7 942 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 RXFP2Q8WXD0 754 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 CFAP57Q96MR6 1250 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 DNAJC7Q99615 494 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.19■□□□□ 0.34
HMGN1-214ENST00000482733 FAM126AQ9BYI3 521 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-214ENST00000482733 PIGVQ9NUD9 493 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 PARVAQ9NVD7 372 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 ARHGEF38Q9NXL2 777 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 ADAMTS1Q9UHI8 967 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 STARD13Q9Y3M8 1113 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 MIA3Q5JRA6 1907 aa17.19■□□□□ 0.34
HMGN1-214ENST00000482733 TCRBV5S1A1TA0A578 114 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 F5H5T6 163 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 H0Y858 1186 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 TBL1XO60907 577 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 DESP17661 470 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 TACR2P21452 398 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 GPD1P21695 349 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 RRM1P23921 792 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 RFC1P35251 1148 aaPredicted RBP17.18■□□□□ 0.34
HMGN1-214ENST00000482733 NRLP54845 237 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 SEC13P55735 322 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 SATB1Q01826 763 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 CSTF1Q05048 431 aaKnown RBP17.18■□□□□ 0.34
HMGN1-214ENST00000482733 MESP2Q0VG99 397 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 TTC39BQ5VTQ0 682 aaPredicted RBP17.18■□□□□ 0.34
HMGN1-214ENST00000482733 RAP1GAP2Q684P5 730 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 RNF43Q68DV7 783 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 TRNP1Q6NT89 227 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 DCUN1D2Q6PH85 259 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 SYT13Q7L8C5 426 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 STRADAQ7RTN6 431 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 ANKS1BQ7Z6G8 1248 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 GAS2L3Q86XJ1 694 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 CNGA4Q8IV77 575 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 JOSD2Q8TAC2 188 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 P2RY11Q96G91 374 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 TKTL2Q9H0I9 626 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 ISCUQ9H1K1 167 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 CALCOCO1Q9P1Z2 691 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 RAPGEFL1Q9UHV5 662 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 XPO7Q9UIA9 1087 aaKnown RBP17.18■□□□□ 0.34
HMGN1-214ENST00000482733 SLC8A2Q9UPR5 921 aa17.18■□□□□ 0.34
HMGN1-214ENST00000482733 TRIM24O15164 1050 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 AP5Z1O43299 807 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 TIMM44O43615 452 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 SP9P0CG40 484 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 TFE3P19532 575 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-214ENST00000482733 KIR2DL1P43626 348 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-214ENST00000482733 ATP11AP98196 1134 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 EIF4HQ15056 248 aaKnown RBP17.17■□□□□ 0.34
HMGN1-214ENST00000482733 CCDC14Q49A88 953 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 C2orf27AQ580R0 203 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 RABGAP1LQ5R372 815 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 PPP1R15BQ5SWA1 713 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 PLEKHA7Q6IQ23 1121 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 WDR59Q6PJI9 974 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 LGI2Q8N0V4 545 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 WFIKKN2Q8TEU8 576 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 ATOH1Q92858 354 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-214ENST00000482733 MRFAP1L1Q96HT8 127 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 PRICKLE1Q96MT3 831 aaPredicted RBP17.17■□□□□ 0.34
HMGN1-214ENST00000482733 PRMT1Q99873 361 aaKnown RBP17.17■□□□□ 0.34
HMGN1-214ENST00000482733 ADAM33Q9BZ11 813 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 ARHGAP20Q9P2F6 1191 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 SCINQ9Y6U3 715 aa17.17■□□□□ 0.34
HMGN1-214ENST00000482733 NPC1O15118 1278 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms