RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 MUC3AQ02505 3323 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 GFRA2O00451 464 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 BUB1O43683 1085 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 CYBBP04839 570 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 SRFP11831 508 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 L1CAMP32004 1257 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 ATXN1P54253 815 aaKnown RBP15.88■□□□□ 0.13
CCM2-215ENST00000482714 RUNX3Q13761 415 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 MPPE1Q53F39 396 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 EFHC2Q5JST6 749 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 C1orf228Q6PIY5 440 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 UBALD2Q8IYN6 164 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 RSAD2Q8WXG1 361 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 TMA16Q96EY4 203 aaKnown RBP15.88■□□□□ 0.13
CCM2-215ENST00000482714 ECT2Q9H8V3 914 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 DONSONQ9NYP3 566 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 MARK1Q9P0L2 795 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 PPARGC1AQ9UBK2 798 aaKnown RBP15.88■□□□□ 0.13
CCM2-215ENST00000482714 OR12D3Q9UGF7 316 aa15.88■□□□□ 0.13
CCM2-215ENST00000482714 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCM2-215ENST00000482714 MACROD2A1Z1Q3 448 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 F5H5T6 163 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 ARNTLO00327 626 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 NCOR1O75376 2440 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 ADH1CP00326 375 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 COMTP21964 271 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 MSNP26038 577 aaKnown RBP15.87■□□□□ 0.13
CCM2-215ENST00000482714 HCAR3P49019 387 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 GAD2Q05329 585 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 FAM133BQ5BKY9 247 aaKnown RBP15.87■□□□□ 0.13
CCM2-215ENST00000482714 MS4A13Q5J8X5 152 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 PIK3R6Q5UE93 754 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 TTC39BQ5VTQ0 682 aaPredicted RBP15.87■□□□□ 0.13
CCM2-215ENST00000482714 RHBDF2Q6PJF5 856 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 RNF135Q8IUD6 432 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 MAP7D3Q8IWC1 876 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 REXO1L1PQ8IX06 675 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 RHOT1Q8IXI2 618 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 CPA6Q8N4T0 437 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 LRRC57Q8N9N7 239 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 TRIM58Q8NG06 486 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 EXOC4Q96A65 974 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 MSANTD3Q96H12 275 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 PRMT1Q99873 361 aaKnown RBP15.87■□□□□ 0.13
CCM2-215ENST00000482714 LZTFL1Q9NQ48 299 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 SPHK2Q9NRA0 654 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 PCSK1NQ9UHG2 260 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.87■□□□□ 0.13
CCM2-215ENST00000482714 HS3ST4Q9Y661 456 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 WNT6Q9Y6F9 365 aa15.87■□□□□ 0.13
CCM2-215ENST00000482714 C5orf42Q9H799 3197 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 TYW5A2RUC4 315 aaKnown RBP15.86■□□□□ 0.13
CCM2-215ENST00000482714 DRGXA6NNA5 263 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 SPOPO43791 374 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 MOCS2O96007 188 aaPredicted RBP15.86■□□□□ 0.13
CCM2-215ENST00000482714 TACR2P21452 398 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 SLC25A11Q02978 314 aaKnown RBP15.86■□□□□ 0.13
CCM2-215ENST00000482714 AUHQ13825 339 aaKnown RBP15.86■□□□□ 0.13
CCM2-215ENST00000482714 GRM2Q14416 872 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 PDK2Q15119 407 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 DHCR24Q15392 516 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 ITPRIPL2Q3MIP1 535 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 PREPLQ4J6C6 727 aaPredicted RBP15.86■□□□□ 0.13
CCM2-215ENST00000482714 RABGAP1LQ5R372 815 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 VSIG1Q86XK7 387 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 CCAR2Q8N163 923 aaKnown RBP15.86■□□□□ 0.13
CCM2-215ENST00000482714 CCDC185Q8N715 623 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 CSGALNACT1Q8TDX6 532 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 ALS2CR12Q96Q35 445 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 C8orf33Q9H7E9 229 aaPredicted RBP15.86■□□□□ 0.13
CCM2-215ENST00000482714 PRDM16Q9HAZ2 1276 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 ANLNQ9NQW6 1124 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 DDX56Q9NY93 547 aaKnown RBP15.86■□□□□ 0.13
CCM2-215ENST00000482714 AMFRQ9UKV5 643 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 DUSP12Q9UNI6 340 aa15.86■□□□□ 0.13
CCM2-215ENST00000482714 HELZP42694 1942 aaKnown RBP15.86■□□□□ 0.13
CCM2-215ENST00000482714 IGLV3-10A0A075B6K4 115 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 CCDC66A2RUB6 948 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 MIF4GDA9UHW6 222 aaKnown RBP15.85■□□□□ 0.13
CCM2-215ENST00000482714 I6L893 689 aaPredicted RBP15.85■□□□□ 0.13
CCM2-215ENST00000482714 HOXC11O43248 304 aaPredicted RBP15.85■□□□□ 0.13
CCM2-215ENST00000482714 PSTPIP1O43586 416 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 ASGR2P07307 311 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 RARAP10276 462 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 SSR1P43307 286 aaKnown RBP15.85■□□□□ 0.13
CCM2-215ENST00000482714 DPYSL2Q16555 572 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 RAB6CQ53S08 254 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 NADSYN1Q6IA69 706 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 FBXL22Q6P050 247 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 TTC16Q8NEE8 873 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 FAM71BQ8TC56 605 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 SLC2A11Q9BYW1 496 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 SIK2Q9H0K1 926 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 RAB6CQ9H0N0 254 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 EBF3Q9H4W6 596 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 HPS4Q9NQG7 708 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 STIM2Q9P246 746 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 RCOR3Q9P2K3 495 aaPredicted RBP15.85■□□□□ 0.13
CCM2-215ENST00000482714 WNT16Q9UBV4 365 aa15.85■□□□□ 0.13
CCM2-215ENST00000482714 AP4E1Q9UPM8 1137 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms