RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 MMADHCQ9H3L0 296 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-220ENST00000482507 DPEP3Q9H4B8 488 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 DHX35Q9H5Z1 703 aaKnown RBP15.35■□□□□ 0.05
ATG4B-220ENST00000482507 TUT1Q9H6E5 874 aaKnown RBP15.35■□□□□ 0.05
ATG4B-220ENST00000482507 PIH1D1Q9NWS0 290 aaKnown RBP15.35■□□□□ 0.05
ATG4B-220ENST00000482507 PLA2G4CQ9UP65 541 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 HBS1LQ9Y450 684 aaKnown RBP15.35■□□□□ 0.05
ATG4B-220ENST00000482507 SCN1AP35498 2009 aa15.35■□□□□ 0.05
ATG4B-220ENST00000482507 MAP3K13O43283 966 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 KRT38O76015 456 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 STAU1O95793 577 aaKnown RBP15.34■□□□□ 0.05
ATG4B-220ENST00000482507 C6orf222P0C671 652 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-220ENST00000482507 CRHR1P34998 444 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 VHLP40337 213 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 CCNHP51946 323 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-220ENST00000482507 POU5F1BQ06416 359 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 THOC5Q13769 683 aaKnown RBP15.34■□□□□ 0.05
ATG4B-220ENST00000482507 CCDC6Q16204 474 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 NBPF20Q3BBV1 942 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 C16orf46Q6P387 395 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 ATG14Q6ZNE5 492 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 PYROXD2Q8N2H3 581 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 CCDC185Q8N715 623 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 STKLD1Q8NE28 680 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 LRRC39Q96DD0 335 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 KCTD15Q96SI1 283 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-220ENST00000482507 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.34■□□□□ 0.052e-7■■□□□ 13
ATG4B-220ENST00000482507 MOCS1Q9NZB8 636 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 EMCNQ9ULC0 261 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 TRIM17Q9Y577 477 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 SNX9Q9Y5X1 595 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 TRIP11Q15643 1979 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 AKR1A1P14550 325 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 VAV1P15498 845 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 TPSB2P20231 275 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 KDSRQ06136 332 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 SLC34A1Q06495 639 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 RCN2Q14257 317 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 TPSAB1Q15661 275 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 SMAD1Q15797 465 aaKnown RBP15.34■□□□□ 0.05
ATG4B-220ENST00000482507 DPYSL2Q16555 572 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 DGKDQ16760 1214 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 SOWAHAQ2M3V2 549 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 LGSNQ5TDP6 509 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 ATG16L1Q676U5 607 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 CDKL3Q8IVW4 592 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-220ENST00000482507 KBTBD2Q8IY47 623 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 SCG3Q8WXD2 468 aaKnown RBP15.34■□□□□ 0.05
ATG4B-220ENST00000482507 SYT15Q9BQS2 421 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 CCDC106Q9BWC9 280 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 PCDHA11Q9Y5I1 949 aa15.34■□□□□ 0.05
ATG4B-220ENST00000482507 WDR27A2RRH5 827 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 A6NJR5 290 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 LYPLA1O75608 230 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-220ENST00000482507 HOXD10P28358 340 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 RAP1GDS1P52306 607 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 ALDH18A1P54886 795 aaKnown RBP15.33■□□□□ 0.04
ATG4B-220ENST00000482507 UBAP2LQ14157 1087 aaKnown RBP15.33■□□□□ 0.04
ATG4B-220ENST00000482507 TSNAXIP1Q2TAA8 658 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 ZNF484Q5JVG2 852 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 LRRC74BQ6ZQY2 392 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 DENND5BQ6ZUT9 1274 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 PDCD7Q8N8D1 485 aaKnown RBP15.33■□□□□ 0.04
ATG4B-220ENST00000482507 MTBPQ96DY7 904 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 FAM161BQ96MY7 647 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 QKIQ96PU8 341 aaKnown RBP eCLIP15.33■□□□□ 0.04
ATG4B-220ENST00000482507 CSPG4P5Q96PW8 444 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 DTLQ9NZJ0 730 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 PRR5-ARHGAP8B1AHC4 643 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 ITM2AO43736 263 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 MYL3P08590 195 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 GSTA2P09210 222 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 GMPRP36959 345 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 ARHGAP8P85298 464 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 SEMA5AQ13591 1074 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 NCBP2-AS2Q69YL0 99 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 SESTD1Q86VW0 696 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 TRIM42Q8IWZ5 723 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 C7orf31Q8N865 590 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 DEPDC1BQ8WUY9 529 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 AP5M1Q9H0R1 490 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 STX18Q9P2W9 335 aaKnown RBP15.33■□□□□ 0.04
ATG4B-220ENST00000482507 TUBGCP4Q9UGJ1 667 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 AP4E1Q9UPM8 1137 aa15.33■□□□□ 0.04
ATG4B-220ENST00000482507 CCDC189A1A4V9 331 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 ALDOAP04075 364 aaKnown RBP15.32■□□□□ 0.04
ATG4B-220ENST00000482507 GNASQ5JWF2 1037 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 NLRP7Q8WX94 980 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 CENPIQ92674 756 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-220ENST00000482507 C18orf25Q96B23 403 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-220ENST00000482507 PGLYRP2Q96PD5 576 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 LGMNQ99538 433 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 WWP1Q9H0M0 922 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 KRT82Q9NSB4 513 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 USP3Q9Y6I4 520 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 ZNF236Q9UL36 1845 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 MAGEC1O60732 1142 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 CCDC130P13994 396 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 GOT1P17174 413 aa15.32■□□□□ 0.04
ATG4B-220ENST00000482507 STX3Q13277 289 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms