RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 EIF4EBP2Q13542 120 aaPredicted RBP13.71□□□□□ -0.21
HDAC1-208ENST00000482310 PPP2R5DQ14738 602 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 ANO4Q32M45 955 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 EML3Q32P44 896 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 KCNT1Q5JUK3 1230 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 BRMS1LQ5PSV4 323 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 TXNRD3NBQ6F5E7 133 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 HTR3DQ70Z44 454 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 BNIPLQ7Z465 357 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 CIR1Q86X95 450 aaPredicted RBP13.71□□□□□ -0.21
HDAC1-208ENST00000482310 RNF135Q8IUD6 432 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 LGI2Q8N0V4 545 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 PYROXD2Q8N2H3 581 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 C17orf53Q8N3J3 647 aaPredicted RBP13.71□□□□□ -0.21
HDAC1-208ENST00000482310 TPCN2Q8NHX9 752 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 CENPIQ92674 756 aaPredicted RBP13.71□□□□□ -0.21
HDAC1-208ENST00000482310 BTN2A3PQ96KV6 586 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 ARHGEF38Q9NXL2 777 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 PLK2Q9NYY3 685 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 GTSE1Q9NYZ3 720 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 STIM2Q9P246 746 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 IGSF9Q9P2J2 1179 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 MUTYHQ9UIF7 546 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 VANGL2Q9ULK5 521 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 USP18Q9UMW8 372 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 HS3ST4Q9Y661 456 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 GRID2IPA4D2P6 1211 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 C19orf67A6NJJ6 358 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 KCNU1A8MYU2 1149 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 SLC9A3R1O14745 358 aaPredicted RBP13.7□□□□□ -0.22
HDAC1-208ENST00000482310 SRGAP2O75044 1071 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 PALMO75781 387 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 ENDOD1O94919 500 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 TACR2P21452 398 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 COMTP21964 271 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 IL1R2P27930 398 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 SOX9P48436 509 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 NUMBP49757 651 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 DNA2P51530 1060 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 FCHO2Q0JRZ9 810 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 TDGQ13569 410 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 CA9Q16790 459 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 ARL13BQ3SXY8 428 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 FAM133BQ5BKY9 247 aaKnown RBP13.7□□□□□ -0.22
HDAC1-208ENST00000482310 MS4A13Q5J8X5 152 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 EFHC2Q5JST6 749 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 LY6G5CQ5SRR4 150 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 SLFN11Q7Z7L1 901 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 C14orf80Q86SX3 495 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 GJD3Q8N144 294 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 CFAP52Q8N1V2 620 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 NIPA2Q8N8Q9 360 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 CSGALNACT1Q8TDX6 532 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 ATP2A3Q93084 1043 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 TRIM44Q96DX7 344 aaPredicted RBP13.7□□□□□ -0.22
HDAC1-208ENST00000482310 FAM122AQ96E09 287 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 MYEOVQ96EZ4 313 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 SNRNP25Q9BV90 132 aaKnown RBP13.7□□□□□ -0.22
HDAC1-208ENST00000482310 C1QTNF1Q9BXJ1 281 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 DHX35Q9H5Z1 703 aaKnown RBP13.7□□□□□ -0.22
HDAC1-208ENST00000482310 HPS4Q9NQG7 708 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 TBC1D14Q9P2M4 693 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 AP4E1Q9UPM8 1137 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 CAPN6Q9Y6Q1 641 aa13.7□□□□□ -0.22
HDAC1-208ENST00000482310 NYNRINQ9P2P1 1898 aaKnown RBP13.7□□□□□ -0.22
HDAC1-208ENST00000482310 OTOL1A6NHN0 477 aaPredicted RBP13.69□□□□□ -0.22
HDAC1-208ENST00000482310 BTNL10A8MVZ5 291 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 NEDD8-MDP1E9PL57 170 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 F5H5T6 163 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 CHADO15335 359 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 CREB3O43889 395 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 NFATC1O95644 943 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 FTCDO95954 541 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 CYP17A1P05093 508 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 ADRA1BP35368 520 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 IRAK1P51617 712 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 SLC25A11Q02978 314 aaKnown RBP13.69□□□□□ -0.22
HDAC1-208ENST00000482310 PDGFRLQ15198 375 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 IFI16Q16666 785 aaKnown RBP13.69□□□□□ -0.22
HDAC1-208ENST00000482310 PPP6R3Q5H9R7 873 aaPredicted RBP13.69□□□□□ -0.22
HDAC1-208ENST00000482310 IER5LQ5T953 404 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 TMEM25Q86YD3 366 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 CPA6Q8N4T0 437 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 NAT16Q8N8M0 369 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 DDI1Q8WTU0 396 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 PRICKLE1Q96MT3 831 aaPredicted RBP13.69□□□□□ -0.22
HDAC1-208ENST00000482310 FAM83CQ9BQN1 747 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.69□□□□□ -0.22
HDAC1-208ENST00000482310 FZD10Q9ULW2 581 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 CA14Q9ULX7 337 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 PACSIN2Q9UNF0 486 aaPredicted RBP13.69□□□□□ -0.22
HDAC1-208ENST00000482310 ZNF510Q9Y2H8 683 aa13.69□□□□□ -0.22
HDAC1-208ENST00000482310 FAM72CH0Y354 149 aa13.68□□□□□ -0.22
HDAC1-208ENST00000482310 ZSCAN12O43309 604 aa13.68□□□□□ -0.22
HDAC1-208ENST00000482310 TBL1XO60907 577 aa13.68□□□□□ -0.22
HDAC1-208ENST00000482310 ADH5P11766 374 aa13.68□□□□□ -0.22
HDAC1-208ENST00000482310 MAN1A1P33908 653 aa13.68□□□□□ -0.22
HDAC1-208ENST00000482310 HADHBP55084 474 aaKnown RBP13.68□□□□□ -0.22
HDAC1-208ENST00000482310 RPS24P62847 133 aaKnown RBP13.68□□□□□ -0.22
HDAC1-208ENST00000482310 RUNX3Q13761 415 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms