RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 CLCA4Q14CN2 919 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 MPEG1Q2M385 716 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.27□□□□□ -1.73
COPA-204ENST00000481522 CLEC9AQ6UXN8 241 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 TOGARAM2Q6ZUX3 1019 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 CHSY1Q86X52 802 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 CCDC28AQ8IWP9 274 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 C16orf71Q8IYS4 520 aaPredicted RBP4.27□□□□□ -1.73
COPA-204ENST00000481522 FSTL5Q8N475 847 aaPredicted RBP4.27□□□□□ -1.73
COPA-204ENST00000481522 C11orf44Q8N8P7 122 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 GLIS1Q8NBF1 620 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 ABHD5Q8WTS1 349 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 VPS50Q96JG6 964 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 RITA1Q96K30 269 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 SELENOOQ9BVL4 669 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.27□□□□□ -1.735e-15■■■□□ 15.7
COPA-204ENST00000481522 PCDHAC1Q9H158 963 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 AS3MTQ9HBK9 375 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 LPAR3Q9UBY5 353 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 SLC27A6Q9Y2P4 619 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 CNTLNQ9NXG0 1405 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 DOPEY1Q5JWR5 2465 aa4.27□□□□□ -1.73
COPA-204ENST00000481522 MARF1Q9Y4F3 1742 aaKnown RBP4.26□□□□□ -1.73
COPA-204ENST00000481522 A8MVJ9 347 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 PRRT4C9JH25 899 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 BTBD19C9JJ37 291 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 SPRY2O43597 315 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 RNF8O76064 485 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 CYP2D6P10635 497 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 MST1P26927 711 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 DIO1P49895 249 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 COPB1P53618 953 aaKnown RBP4.26□□□□□ -1.73
COPA-204ENST00000481522 RHBDL3P58872 404 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 EIF4A1P60842 406 aaKnown RBP4.26□□□□□ -1.73
COPA-204ENST00000481522 LMAN2Q12907 356 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 MAPKAPK3Q16644 382 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 FAM187BQ17R55 369 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 SLC5A9Q2M3M2 681 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 C4orf46Q504U0 113 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 TMEM63BQ5T3F8 832 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 TMEM65Q6PI78 240 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 ZNF66Q6ZN08 573 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 KIAA0408Q6ZU52 694 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 USP49Q70CQ1 688 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 BCDIN3DQ7Z5W3 292 aaKnown RBP4.26□□□□□ -1.73
COPA-204ENST00000481522 P3H2Q8IVL5 708 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 SYTL1Q8IYJ3 562 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 WDYHV1Q96HA8 205 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 CCDC17Q96LX7 622 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 STK33Q9BYT3 514 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 NECTIN3Q9NQS3 549 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 TM7SF3Q9NS93 570 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 SLC52A1Q9NWF4 448 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 RGL1Q9NZL6 768 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 MGAT4CQ9UBM8 478 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 ZMYND8Q9ULU4 1186 aaPredicted RBP4.26□□□□□ -1.73
COPA-204ENST00000481522 FMN1Q68DA7 1419 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 COL15A1P39059 1388 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 CNTNAP1P78357 1384 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 ATP7AQ04656 1500 aa4.26□□□□□ -1.73
COPA-204ENST00000481522 CLTCQ00610 1675 aaKnown RBP4.26□□□□□ -1.73
COPA-204ENST00000481522 GCN1Q92616 2671 aaKnown RBP4.25□□□□□ -1.73
COPA-204ENST00000481522 TMEM232C9JQI7 657 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 PPP6CO00743 305 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 ADAMTS3O15072 1205 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 ABCC5O15440 1437 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 TUBB4AP04350 444 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 TMEM225BP0DP42 221 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 ARP10275 920 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 MPGP29372 298 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 SERPINB3P29508 390 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 PPM1AP35813 382 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 TECP42680 631 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 TXNL4AP83876 142 aaKnown RBP4.25□□□□□ -1.73
COPA-204ENST00000481522 NSUN2Q08J23 767 aaKnown RBP eCLIP4.25□□□□□ -1.73
COPA-204ENST00000481522 KCNB1Q14721 858 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 STARD3Q14849 445 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 FNDC1Q4ZHG4 1894 aaPredicted RBP4.25□□□□□ -1.73
COPA-204ENST00000481522 KLHL22Q53GT1 634 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 ARL6IP4Q66PJ3 421 aaKnown RBP4.25□□□□□ -1.73
COPA-204ENST00000481522 RAP1GAP2Q684P5 730 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 ABLIM2Q6H8Q1 611 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 NEK8Q86SG6 692 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 METTL25Q8N6Q8 603 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 MAFAQ8NHW3 353 aaPredicted RBP4.25□□□□□ -1.73
COPA-204ENST00000481522 ADAMTS18Q8TE60 1221 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 GRAMD1AQ96CP6 724 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 TMEM41AQ96HV5 264 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 C5orf34Q96MH7 638 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 GDF15Q99988 308 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 CDC23Q9UJX2 597 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 SLC39A10Q9ULF5 831 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 MAGED2Q9UNF1 606 aaPredicted RBP4.25□□□□□ -1.73
COPA-204ENST00000481522 DIP2CQ9Y2E4 1556 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 LRCH1Q9Y2L9 728 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 DISP1Q96F81 1524 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 USP34Q70CQ2 3546 aa4.25□□□□□ -1.73
COPA-204ENST00000481522 LTBP1Q14766 1721 aa4.24□□□□□ -1.73
COPA-204ENST00000481522 PLCH2O75038 1416 aa4.24□□□□□ -1.73
COPA-204ENST00000481522 TPRP12270 2363 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms