RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 CTC1Q2NKJ3 1217 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 C5orf22Q49AR2 442 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 MANEALQ5VSG8 457 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 SLC9A4Q6AI14 798 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 CES5AQ6NT32 575 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 HTR3DQ70Z44 454 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 MAATS1Q7Z4T9 603 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 MIB1Q86YT6 1006 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 HS6ST3Q8IZP7 471 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 CMTM8Q8IZV2 173 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 MMGT1Q8N4V1 131 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 CCDC26Q8TAB7 109 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 SHKBP1Q8TBC3 707 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 GRK7Q8WTQ7 553 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 RUBCNQ92622 972 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 E2F7Q96AV8 911 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 HAUS1Q96CS2 278 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 OTUB2Q96DC9 234 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 TBC1D31Q96DN5 1066 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 CAPZA3Q96KX2 299 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 RIPOR3Q96MK2 946 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 CSPG4P5Q96PW8 444 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 KCTD15Q96SI1 283 aaPredicted RBP10.51□□□□□ -0.73
USP39-215ENST00000481409 BRD8Q9H0E9 1235 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 ADAM7Q9H2U9 754 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 LRRC19Q9H756 370 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 OBP2AQ9NY56 170 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 GDE1Q9NZC3 331 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 COX16Q9P0S2 106 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 MRPS23Q9Y3D9 190 aaKnown RBP10.51□□□□□ -0.73
USP39-215ENST00000481409 MTCH2Q9Y6C9 303 aa10.51□□□□□ -0.73
USP39-215ENST00000481409 DAPK3O43293 454 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 MSI1O43347 362 aaKnown RBP10.5□□□□□ -0.73
USP39-215ENST00000481409 ACSL4O60488 711 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 CST8O60676 142 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 PHF2O75151 1096 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 CSPG5O95196 566 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 CKMP06732 381 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 CHKAP35790 457 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 MTHFRP42898 656 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 ZNF33AQ06730 810 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 DPYSQ14117 519 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 DHX34Q14147 1143 aaKnown RBP10.5□□□□□ -0.73
USP39-215ENST00000481409 PAFAH1B3Q15102 231 aaKnown RBP10.5□□□□□ -0.73
USP39-215ENST00000481409 RAB6CQ53S08 254 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 PPP6R3Q5H9R7 873 aaPredicted RBP10.5□□□□□ -0.73
USP39-215ENST00000481409 MS4A13Q5J8X5 152 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 RABGAP1LQ5R372 815 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 ATAT1Q5SQI0 421 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 ADGRF1Q5T601 910 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 GPR158Q5T848 1215 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 TXNDC8Q6A555 127 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 RFX8Q6ZV50 586 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 SYDE1Q6ZW31 735 aaPredicted RBP10.5□□□□□ -0.73
USP39-215ENST00000481409 GRASPQ7Z6J2 395 aaPredicted RBP10.5□□□□□ -0.73
USP39-215ENST00000481409 RFX6Q8HWS3 928 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 FAM217AQ8IXS0 508 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 CPXM2Q8N436 756 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 ARL14EPQ8N8R7 260 aaPredicted RBP10.5□□□□□ -0.73
USP39-215ENST00000481409 MAB21L3Q8N8X9 362 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 ZNF557Q8N988 423 aaPredicted RBP10.5□□□□□ -0.73
USP39-215ENST00000481409 CCHCR1Q8TD31 782 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 P3H4Q92791 437 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 SLCO2A1Q92959 643 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 PABPC5Q96DU9 382 aaKnown RBP10.5□□□□□ -0.73
USP39-215ENST00000481409 MS4A14Q96JA4 679 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 ZFRQ96KR1 1074 aaKnown RBP10.5□□□□□ -0.73
USP39-215ENST00000481409 NECTIN4Q96NY8 510 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 FERMT1Q9BQL6 677 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 CARD6Q9BX69 1037 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 RNF38Q9H0F5 515 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 RAB6CQ9H0N0 254 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 TRPC7Q9HCX4 862 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 CWC15Q9P013 229 aaKnown RBP10.5□□□□□ -0.73
USP39-215ENST00000481409 TBC1D14Q9P2M4 693 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 PCYOX1Q9UHG3 505 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 NUDT5Q9UKK9 219 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 DRG1Q9Y295 367 aaKnown RBP10.5□□□□□ -0.73
USP39-215ENST00000481409 SH3BP1Q9Y3L3 701 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 HS3ST4Q9Y661 456 aa10.5□□□□□ -0.73
USP39-215ENST00000481409 HELZP42694 1942 aaKnown RBP10.5□□□□□ -0.73
USP39-215ENST00000481409 TYW5A2RUC4 315 aaKnown RBP10.49□□□□□ -0.73
USP39-215ENST00000481409 CFAP69A5D8W1 941 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 DRGXA6NNA5 263 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 HACD1B0YJ81 288 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 E9PAM4 449 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 F5H5T6 163 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 PI4K2BG5E9Z4 385 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 RFXAPO00287 272 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 PDE2AO00408 941 aaPredicted RBP10.49□□□□□ -0.73
USP39-215ENST00000481409 RIOK3O14730 519 aaKnown RBP10.49□□□□□ -0.73
USP39-215ENST00000481409 SLC9A3R1O14745 358 aaPredicted RBP10.49□□□□□ -0.73
USP39-215ENST00000481409 NDC80O14777 642 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 CREB3O43889 395 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 MOSPD3O75425 235 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 LRIG2O94898 1065 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 GLP2RO95838 553 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 RHOQP17081 205 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 MX2P20592 715 aa10.49□□□□□ -0.73
USP39-215ENST00000481409 FSHRP23945 695 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms