RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 THG1LQ9NWX6 298 aaKnown RBP6.95□□□□□ -1.3
LRCH3-216ENST00000481048 NDRG2Q9UN36 371 aaKnown RBP6.95□□□□□ -1.3
LRCH3-216ENST00000481048 EXOC7Q9UPT5 735 aa6.95□□□□□ -1.3
LRCH3-216ENST00000481048 TIMM13Q9Y5L4 95 aaPredicted RBP6.95□□□□□ -1.3
LRCH3-216ENST00000481048 TSC2P49815 1807 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 COL4A3Q01955 1670 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 PTPRDP23468 1912 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 CCDC163A0A0D9SF12 145 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 NUDT19A8MXV4 375 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 CYB561D2O14569 222 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 TBCAO75347 108 aaKnown RBP6.94□□□□□ -1.3
LRCH3-216ENST00000481048 IL18RAPO95256 599 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 KRT18P05783 430 aaKnown RBP6.94□□□□□ -1.3
LRCH3-216ENST00000481048 RETP07949 1114 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 CELA3BP08861 270 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 GJA1P17302 382 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 PDCP20941 246 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 CCNE1P24864 410 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 DDX6P26196 483 aaKnown RBP eCLIP6.94□□□□□ -1.3
LRCH3-216ENST00000481048 PNPLA4P41247 253 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 KPNA1P52294 538 aaPredicted RBP6.94□□□□□ -1.3
LRCH3-216ENST00000481048 CYP4F8P98187 520 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 AMPD2Q01433 879 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 TAGLNQ01995 201 aaKnown RBP6.94□□□□□ -1.3
LRCH3-216ENST00000481048 SPAG1Q07617 926 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 SV2CQ496J9 727 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 GPR158Q5T848 1215 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 SLC39A4Q6P5W5 647 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 DCP1BQ8IZD4 617 aaKnown RBP6.94□□□□□ -1.3
LRCH3-216ENST00000481048 ATAD1Q8NBU5 361 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 RASSF8Q8NHQ8 419 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 BPIFB1Q8TDL5 484 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 CACTINQ8WUQ7 758 aaKnown RBP6.94□□□□□ -1.3
LRCH3-216ENST00000481048 PWWP2AQ96N64 755 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 GCNAQ96QF7 691 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 CDADC1Q9BWV3 514 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 ERVK13-1Q9NX77 482 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 DPP3Q9NY33 737 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 AGO2Q9UKV8 859 aaKnown RBP6.94□□□□□ -1.3
LRCH3-216ENST00000481048 MORC2Q9Y6X9 1032 aaPredicted RBP6.94□□□□□ -1.3
LRCH3-216ENST00000481048 EML5Q05BV3 1969 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 DMXL1Q9Y485 3027 aa6.94□□□□□ -1.3
LRCH3-216ENST00000481048 THADAQ6YHU6 1953 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 KPNA7A9QM74 516 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 ANKRD63C9JTQ0 380 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 SPECC1L-ADORA2AF8WAN1 911 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 KIAA0391O15091 583 aaKnown RBP6.93□□□□□ -1.3
LRCH3-216ENST00000481048 OR4Q2P0C623 313 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 CSH1P0DML2 217 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 CSH2P0DML3 217 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 HAPLN1P10915 354 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-216ENST00000481048 GAP43P17677 238 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 TGM1P22735 817 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 GABRR2P28476 465 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 NMT1P30419 496 aaKnown RBP6.93□□□□□ -1.3
LRCH3-216ENST00000481048 EIF4A3P38919 411 aaKnown RBP6.93□□□□□ -1.3
LRCH3-216ENST00000481048 ACOT2P49753 483 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 ALCAMQ13740 583 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 DHX8Q14562 1220 aaKnown RBP6.93□□□□□ -1.3
LRCH3-216ENST00000481048 KARSQ15046 597 aaKnown RBP6.93□□□□□ -1.3
LRCH3-216ENST00000481048 SF3A1Q15459 793 aaKnown RBP6.93□□□□□ -1.3
LRCH3-216ENST00000481048 TAF12Q16514 161 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 NFE2Q16621 373 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-216ENST00000481048 MGAT5BQ3V5L5 792 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 SLC39A12Q504Y0 691 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 TSSK4Q6SA08 328 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 NLRC3Q7RTR2 1065 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 SLCO6A1Q86UG4 719 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 LONP2Q86WA8 852 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 TMEM86AQ8N2M4 240 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 NUP43Q8NFH3 380 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 LEO1Q8WVC0 666 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-216ENST00000481048 POMGNT1Q8WZA1 660 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 EXOC4Q96A65 974 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 CEP295NLQ96MC4 621 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 ZNF560Q96MR9 790 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 ACBD6Q9BR61 282 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 PYM1Q9BRP8 204 aaKnown RBP6.93□□□□□ -1.3
LRCH3-216ENST00000481048 STRA6Q9BX79 667 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 ZHX3Q9H4I2 956 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 KIF9Q9HAQ2 790 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 GFOD1Q9NXC2 390 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 UXTQ9UBK9 157 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-216ENST00000481048 PCDHA5Q9Y5H7 936 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 SRPRBQ9Y5M8 271 aaKnown RBP6.93□□□□□ -1.3
LRCH3-216ENST00000481048 EPG5Q9HCE0 2579 aa6.93□□□□□ -1.3
LRCH3-216ENST00000481048 MAP1BP46821 2468 aaKnown RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 MYO16Q9Y6X6 1858 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 ASCC3Q8N3C0 2202 aaKnown RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 HELZP42694 1942 aaKnown RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 PPEF2O14830 753 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 GREM1O60565 184 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 BUB1BO60566 1050 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 ATG13O75143 517 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 ENDOUP21128 410 aaKnown RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 AVPR1AP37288 418 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 CCNFP41002 786 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 GUCY2FP51841 1108 aa6.92□□□□□ -1.3
LRCH3-216ENST00000481048 ATXN1P54253 815 aaKnown RBP6.92□□□□□ -1.3
LRCH3-216ENST00000481048 TSPY1Q01534 308 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms