RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 KBTBD4Q9NVX7 518 aa13.98□□□□□ -0.17
NDC1-202ENST00000480952 TFIP11Q9UBB9 837 aaKnown RBP13.98□□□□□ -0.17
NDC1-202ENST00000480952 SUN2Q9UH99 717 aa13.98□□□□□ -0.17
NDC1-202ENST00000480952 USP3Q9Y6I4 520 aa13.98□□□□□ -0.17
NDC1-202ENST00000480952 YKT6O15498 198 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 CD2BP2O95400 341 aaKnown RBP13.97□□□□□ -0.17
NDC1-202ENST00000480952 ATP5BP06576 529 aaKnown RBP13.97□□□□□ -0.17
NDC1-202ENST00000480952 NEFLP07196 543 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 GLDCP23378 1020 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 HOXD9P28356 352 aaPredicted RBP13.97□□□□□ -0.17
NDC1-202ENST00000480952 ASPAP45381 313 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 PDE4CQ08493 712 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 KCNH2Q12809 1159 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 ILKQ13418 452 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 SHBQ15464 509 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 SPOPLQ6IQ16 392 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 USP30Q70CQ3 517 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 ARHGAP18Q8N392 663 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 TSC1Q92574 1164 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 TWNKQ96RR1 684 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 NT5C1AQ9BXI3 368 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 DUSP16Q9BY84 665 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 DNAI2Q9GZS0 605 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 GDF3Q9NR23 364 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 ABCB8Q9NUT2 735 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 FBXL12Q9NXK8 326 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 CLCA2Q9UQC9 943 aa13.97□□□□□ -0.17
NDC1-202ENST00000480952 WNT1P04628 370 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 DLDP09622 509 aaKnown RBP13.96□□□□□ -0.17
NDC1-202ENST00000480952 CD38P28907 300 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 HARS2P49590 506 aaKnown RBP13.96□□□□□ -0.17
NDC1-202ENST00000480952 GALCP54803 685 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 SFSWAPQ12872 951 aaKnown RBP13.96□□□□□ -0.17
NDC1-202ENST00000480952 SLC39A14Q15043 492 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 KNOP1Q1ED39 458 aaKnown RBP13.96□□□□□ -0.17
NDC1-202ENST00000480952 TBC1D25Q3MII6 688 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 MBLAC2Q68D91 279 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 NCEH1Q6PIU2 408 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 ADIPOR2Q86V24 386 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 ERICH1Q86X53 443 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 FAM217AQ8IXS0 508 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 AHI1Q8N157 1196 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 GOLGA5Q8TBA6 731 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 PLD4Q96BZ4 506 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 DHX58Q96C10 678 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 TMA16Q96EY4 203 aaKnown RBP13.96□□□□□ -0.17
NDC1-202ENST00000480952 LGMNQ99538 433 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 PABPC3Q9H361 631 aaKnown RBP13.96□□□□□ -0.17
NDC1-202ENST00000480952 CUEDC2Q9H467 287 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 CLMPQ9H6B4 373 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 SLC39A2Q9NP94 309 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 GGA2Q9UJY4 613 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 SCML1Q9UN30 329 aa13.96□□□□□ -0.17
NDC1-202ENST00000480952 PTPRQQ9UMZ3 2332 aa13.96□□□□□ -0.18
NDC1-202ENST00000480952 NUMA1Q14980 2115 aa13.96□□□□□ -0.18
NDC1-202ENST00000480952 LRRC72A6NJI9 287 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 RNASEH1O60930 286 aaKnown RBP13.95□□□□□ -0.18
NDC1-202ENST00000480952 ASS1P00966 412 aaKnown RBP13.95□□□□□ -0.18
NDC1-202ENST00000480952 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 PABPC1P11940 636 aaKnown RBP13.95□□□□□ -0.18
NDC1-202ENST00000480952 CKMT2P17540 419 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 EPHA8P29322 1005 aaPredicted RBP13.95□□□□□ -0.18
NDC1-202ENST00000480952 ZNF445P59923 1031 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 YWHAGP61981 247 aaKnown RBP eCLIP13.95□□□□□ -0.18
NDC1-202ENST00000480952 DLG4P78352 724 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 RHDQ02161 417 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 KCNC4Q03721 635 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 INCA1Q0VD86 236 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 BNIP3Q12983 259 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 ZACNQ401N2 412 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 SLC45A4Q5BKX6 768 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 BROXQ5VW32 411 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 CNNM4Q6P4Q7 775 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 UNC13DQ70J99 1090 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 CACTIN-AS1Q8N1I8 211 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 ZNF248Q8NDW4 579 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 WBP1Q96G27 269 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 NAF1Q96HR8 494 aaKnown RBP13.95□□□□□ -0.18
NDC1-202ENST00000480952 C7orf25Q9BPX7 421 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 RSPH9Q9H1X1 276 aaPredicted RBP13.95□□□□□ -0.18
NDC1-202ENST00000480952 EBF2Q9HAK2 575 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 PPP4R2Q9NY27 417 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 MUC22E2RYF6 1773 aaPredicted RBP13.95□□□□□ -0.18
NDC1-202ENST00000480952 TMEM131Q92545 1883 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 CKAP5Q14008 2032 aa13.95□□□□□ -0.18
NDC1-202ENST00000480952 MGAQ8IWI9 3026 aa13.94□□□□□ -0.18
NDC1-202ENST00000480952 TLR4O00206 839 aa13.94□□□□□ -0.18
NDC1-202ENST00000480952 RNASEH2AO75792 299 aaKnown RBP13.94□□□□□ -0.18
NDC1-202ENST00000480952 CD58P19256 250 aa13.94□□□□□ -0.18
NDC1-202ENST00000480952 POLR2EP19388 210 aaKnown RBP13.94□□□□□ -0.18
NDC1-202ENST00000480952 PDCP20941 246 aa13.94□□□□□ -0.18
NDC1-202ENST00000480952 PIK3CAP42336 1068 aa13.94□□□□□ -0.18
NDC1-202ENST00000480952 TMPRSS3P57727 454 aa13.94□□□□□ -0.18
NDC1-202ENST00000480952 TRIP4Q15650 581 aaPredicted RBP13.94□□□□□ -0.18
NDC1-202ENST00000480952 E2F4Q16254 413 aa13.94□□□□□ -0.18
NDC1-202ENST00000480952 PPP1R26Q5T8A7 1209 aaPredicted RBP13.94□□□□□ -0.18
NDC1-202ENST00000480952 SV2AQ7L0J3 742 aa13.94□□□□□ -0.18
NDC1-202ENST00000480952 KIAA0907Q7Z7F0 614 aaPredicted RBP13.94□□□□□ -0.18
NDC1-202ENST00000480952 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.94□□□□□ -0.18
NDC1-202ENST00000480952 FAM181AQ8N9Y4 354 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms