RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 KIAA1211LQ6NV74 962 aa17.66■□□□□ 0.42
HSPG2-209ENST00000480900 OLFML1Q6UWY5 402 aa17.66■□□□□ 0.42
HSPG2-209ENST00000480900 PRR23CQ6ZRP0 262 aa17.66■□□□□ 0.42
HSPG2-209ENST00000480900 FAM183BPQ6ZVS7 135 aa17.66■□□□□ 0.42
HSPG2-209ENST00000480900 SLC26A9Q7LBE3 791 aa17.66■□□□□ 0.42
HSPG2-209ENST00000480900 PGBD3Q8N328 593 aa17.66■□□□□ 0.42
HSPG2-209ENST00000480900 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.66■□□□□ 0.42
HSPG2-209ENST00000480900 ZNF557Q8N988 423 aaPredicted RBP17.66■□□□□ 0.42
HSPG2-209ENST00000480900 HJURPQ8NCD3 748 aaPredicted RBP17.66■□□□□ 0.42
HSPG2-209ENST00000480900 TMEM35BQ8NCS4 154 aa17.66■□□□□ 0.42
HSPG2-209ENST00000480900 SYNCQ9H7C4 482 aa17.66■□□□□ 0.42
HSPG2-209ENST00000480900 LIMA1Q9UHB6 759 aaKnown RBP17.66■□□□□ 0.42
HSPG2-209ENST00000480900 STON1Q9Y6Q2 735 aa17.66■□□□□ 0.42
HSPG2-209ENST00000480900 CACNA1EQ15878 2313 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 GOLGA6L7A0A1B0GV03 622 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 TYW5A2RUC4 315 aaKnown RBP17.65■□□□□ 0.42
HSPG2-209ENST00000480900 LGALS16A8MUM7 142 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 TBL1XO60907 577 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 LSM8O95777 96 aaKnown RBP17.65■□□□□ 0.42
HSPG2-209ENST00000480900 ZNF18P17022 549 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 SDHBP21912 280 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 HLA-FP30511 346 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 MPLP40238 635 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 CDK17Q00537 523 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 SLC6A3Q01959 620 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 EIF4EBP2Q13542 120 aaPredicted RBP17.65■□□□□ 0.42
HSPG2-209ENST00000480900 STARD3Q14849 445 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 TAF5Q15542 800 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 MAP7D1Q3KQU3 841 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 PLA2G2CQ5R387 149 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 OR6B2Q6IFH4 312 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 KIAA0907Q7Z7F0 614 aaPredicted RBP17.65■□□□□ 0.42
HSPG2-209ENST00000480900 ZDHHC17Q8IUH5 632 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 ZNF397Q8NF99 534 aaPredicted RBP17.65■□□□□ 0.42
HSPG2-209ENST00000480900 RLN3Q8WXF3 142 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 DDX1Q92499 740 aaKnown RBP17.65■□□□□ 0.42
HSPG2-209ENST00000480900 CIPCQ9C0C6 399 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 PDCL3Q9H2J4 239 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 FAM207AQ9NSI2 230 aaPredicted RBP17.65■□□□□ 0.42
HSPG2-209ENST00000480900 DLL3Q9NYJ7 618 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 CALCOCO1Q9P1Z2 691 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 SIK3Q9Y2K2 1263 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.65■□□□□ 0.42
HSPG2-209ENST00000480900 LAMA1P25391 3075 aa17.65■□□□□ 0.42
HSPG2-209ENST00000480900 LRRC10BA6NIK2 292 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 WASH3PC4AMC7 463 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 DAB1O75553 588 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 MOCS2O96007 188 aaPredicted RBP17.64■□□□□ 0.41
HSPG2-209ENST00000480900 ZNF806P0C7X5 589 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 SLC2A3P11169 496 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 PABPC1P11940 636 aaKnown RBP17.64■□□□□ 0.41
HSPG2-209ENST00000480900 NDUFV2P19404 249 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 SCNN1AP37088 669 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 IL12RB1P42701 662 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 KLK7P49862 253 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 POLR2FP61218 127 aaKnown RBP17.64■□□□□ 0.41
HSPG2-209ENST00000480900 PITX1P78337 314 aaPredicted RBP17.64■□□□□ 0.41
HSPG2-209ENST00000480900 ZNF234Q14588 700 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 PUM1Q14671 1186 aaKnown RBP eCLIP17.64■□□□□ 0.41
HSPG2-209ENST00000480900 NCAPHQ15003 741 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 RSPO4Q2I0M5 234 aaPredicted RBP17.64■□□□□ 0.41
HSPG2-209ENST00000480900 ZC3H12AQ5D1E8 599 aaKnown RBP17.64■□□□□ 0.41
HSPG2-209ENST00000480900 MS4A13Q5J8X5 152 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 TMEM215Q68D42 235 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 NOP9Q86U38 636 aaKnown RBP17.64■□□□□ 0.41
HSPG2-209ENST00000480900 DEFB106AQ8N104 65 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 AHI1Q8N157 1196 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 EPS8L1Q8TE68 723 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 BTN2A3PQ96KV6 586 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 PRICKLE1Q96MT3 831 aaPredicted RBP17.64■□□□□ 0.41
HSPG2-209ENST00000480900 NAT10Q9H0A0 1025 aaKnown RBP17.64■□□□□ 0.41
HSPG2-209ENST00000480900 NUCKS1Q9H1E3 243 aaKnown RBP17.64■□□□□ 0.41
HSPG2-209ENST00000480900 HSD3B7Q9H2F3 369 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 FAM204AQ9H8W3 233 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 ABCB8Q9NUT2 735 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.64■□□□□ 0.41
HSPG2-209ENST00000480900 GGA2Q9UJY4 613 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 RAD54BQ9Y620 910 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 DOCK4Q8N1I0 1966 aa17.64■□□□□ 0.41
HSPG2-209ENST00000480900 NUMA1Q14980 2115 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 BCLAF3A2AJT9 711 aaKnown RBP17.63■□□□□ 0.41
HSPG2-209ENST00000480900 ZNF217O75362 1048 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 GRAP2O75791 330 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 GABRB2P47870 512 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 JAM2P57087 298 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 RPS24P62847 133 aaKnown RBP17.63■□□□□ 0.41
HSPG2-209ENST00000480900 CREB5Q02930 508 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 ARID5AQ03989 594 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 SPDYCQ5MJ68 293 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 TAF3Q5VWG9 929 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 CHST9Q7L1S5 443 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 LPCAT2Q7L5N7 544 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 ZNF677Q86XU0 584 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 ATP6V0D2Q8N8Y2 350 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 WFDC5Q8TCV5 224 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 NETO1Q8TDF5 533 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 SORCS1Q8WY21 1168 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 MRGPRX1Q96LB2 322 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 VPS45Q9NRW7 570 aa17.63■□□□□ 0.41
HSPG2-209ENST00000480900 DDIT4Q9NX09 232 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms