RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 RTN3O95197 1032 aaPredicted RBP12.5□□□□□ -0.41
USP11-208ENST00000480104 ZDHHC11BP0C7U3 371 aa12.5□□□□□ -0.41
USP11-208ENST00000480104 GUCY2CP25092 1073 aa12.5□□□□□ -0.41
USP11-208ENST00000480104 PDX1P52945 283 aa12.5□□□□□ -0.41
USP11-208ENST00000480104 NAPEPLDQ6IQ20 393 aa12.5□□□□□ -0.41
USP11-208ENST00000480104 CRTC1Q6UUV9 634 aa12.5□□□□□ -0.41
USP11-208ENST00000480104 Q6ZNB5 142 aa12.5□□□□□ -0.41
USP11-208ENST00000480104 RSRC2Q7L4I2 434 aaKnown RBP12.5□□□□□ -0.41
USP11-208ENST00000480104 LRRC52Q8N7C0 313 aa12.5□□□□□ -0.41
USP11-208ENST00000480104 MYCBPAPQ8TBZ2 947 aa12.5□□□□□ -0.41
USP11-208ENST00000480104 GOLGA1Q92805 767 aa12.5□□□□□ -0.41
USP11-208ENST00000480104 ZNF518BQ9C0D4 1074 aa12.5□□□□□ -0.41
USP11-208ENST00000480104 SEL1LQ9UBV2 794 aa12.5□□□□□ -0.41
USP11-208ENST00000480104 A0A1W2PP55 124 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 PLD2O14939 933 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 CASC3O15234 703 aaKnown RBP12.49□□□□□ -0.41
USP11-208ENST00000480104 ALPPL2P10696 532 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 NCKAP1LP55160 1127 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 MLLT10P55197 1068 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 WNT7BP56706 349 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 PPP2CBP62714 309 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 PPP2CAP67775 309 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 TFAMQ00059 246 aaKnown RBP12.49□□□□□ -0.41
USP11-208ENST00000480104 GOLGA8FQ08AF8 430 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 GOLGA8DPQ0D2H9 430 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 STK3Q13188 491 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 CDKN3Q16667 212 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 GUSBP11Q6P575 273 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 HS2ST1Q7LGA3 356 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 C9orf43Q8TAL5 461 aaPredicted RBP12.49□□□□□ -0.41
USP11-208ENST00000480104 GTF3C6Q969F1 213 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
USP11-208ENST00000480104 TIPINQ9BVW5 301 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 NEUROG2Q9H2A3 272 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 USP29Q9HBJ7 922 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 BRMS1Q9HCU9 246 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 CUEDC1Q9NWM3 386 aaPredicted RBP12.49□□□□□ -0.41
USP11-208ENST00000480104 NLGN3Q9NZ94 848 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 SEPT10Q9P0V9 454 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 ORC3Q9UBD5 711 aaPredicted RBP12.49□□□□□ -0.41
USP11-208ENST00000480104 DKK3Q9UBP4 350 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 DNM3Q9UQ16 869 aa12.49□□□□□ -0.41
USP11-208ENST00000480104 CPED1A4D0V7 1026 aa12.48□□□□□ -0.41
USP11-208ENST00000480104 TISP43B9A030 160 aa12.48□□□□□ -0.41
USP11-208ENST00000480104 TULP1O00294 542 aaPredicted RBP12.48□□□□□ -0.41
USP11-208ENST00000480104 CLDN5O00501 218 aa12.48□□□□□ -0.41
USP11-208ENST00000480104 RNASEH2AO75792 299 aaKnown RBP12.48□□□□□ -0.41
USP11-208ENST00000480104 PRKCGP05129 697 aa12.48□□□□□ -0.41
USP11-208ENST00000480104 SLC5A3P53794 718 aa12.48□□□□□ -0.41
USP11-208ENST00000480104 TOB2Q14106 344 aaPredicted RBP12.48□□□□□ -0.41
USP11-208ENST00000480104 EFL1Q7Z2Z2 1120 aaKnown RBP12.48□□□□□ -0.41
USP11-208ENST00000480104 KCNK18Q7Z418 384 aa12.48□□□□□ -0.41
USP11-208ENST00000480104 IQCHQ86VS3 1027 aa12.48□□□□□ -0.41
USP11-208ENST00000480104 CXorf38Q8TB03 319 aa12.48□□□□□ -0.41
USP11-208ENST00000480104 SNX29Q8TEQ0 813 aa12.48□□□□□ -0.41
USP11-208ENST00000480104 ELOVL4Q9GZR5 314 aa12.48□□□□□ -0.41
USP11-208ENST00000480104 RSPH9Q9H1X1 276 aaPredicted RBP12.48□□□□□ -0.41
USP11-208ENST00000480104 EVA1BQ9NVM1 165 aa12.48□□□□□ -0.41
USP11-208ENST00000480104 KCNG1Q9UIX4 513 aa12.48□□□□□ -0.41
USP11-208ENST00000480104 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.47□□□□□ -0.41
USP11-208ENST00000480104 H0YCG3 227 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 MDM4O15151 490 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 MID1O15344 667 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 LATO43561 262 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 TIMM44O43615 452 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 TCEA3O75764 348 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 PIAS2O75928 621 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 RARGP13631 454 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 HGFP14210 728 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 UGT1A5P35504 534 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 HARS2P49590 506 aaKnown RBP12.47□□□□□ -0.41
USP11-208ENST00000480104 EHHADHQ08426 723 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 ZNF177Q13360 481 aaPredicted RBP12.47□□□□□ -0.41
USP11-208ENST00000480104 ADALQ6DHV7 355 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 LIMS2Q7Z4I7 341 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 FBXO39Q8N4B4 442 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 CSGALNACT2Q8N6G5 542 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 SLC12A9Q9BXP2 914 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 MTG2Q9H4K7 406 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 SCML1Q9UN30 329 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 PLA2G4CQ9UP65 541 aa12.47□□□□□ -0.41
USP11-208ENST00000480104 MED13LQ71F56 2210 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 SDK2Q58EX2 2172 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 ANKRD63C9JTQ0 380 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 K7ESM1 405 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 MAGEC1O60732 1142 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 VPS4BO75351 444 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 NEBLO76041 1014 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 IL18RAPO95256 599 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 KRT19P08727 400 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 TRAPPC10P48553 1259 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 ADPRHP54922 357 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 SFSWAPQ12872 951 aaKnown RBP12.46□□□□□ -0.41
USP11-208ENST00000480104 OVGP1Q12889 678 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 AAMPQ13685 434 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 CRELD2Q6UXH1 353 aaPredicted RBP12.46□□□□□ -0.41
USP11-208ENST00000480104 ZFAND4Q86XD8 727 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 NT5DC4Q86YG4 428 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 KCNN1Q92952 543 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 KCNK16Q96T55 309 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms