RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 GOLPH3Q9H4A6 298 aa11.59□□□□□ -0.55
CLDN11-205ENST00000480067 ANLNQ9NQW6 1124 aa11.59□□□□□ -0.55
CLDN11-205ENST00000480067 TMPRSS4Q9NRS4 437 aa11.59□□□□□ -0.55
CLDN11-205ENST00000480067 STOML2Q9UJZ1 356 aa11.59□□□□□ -0.55
CLDN11-205ENST00000480067 FZD10Q9ULW2 581 aa11.59□□□□□ -0.55
CLDN11-205ENST00000480067 OBSL1O75147 1896 aa11.59□□□□□ -0.55
CLDN11-205ENST00000480067 DENND4CQ5VZ89 1909 aa11.59□□□□□ -0.55
CLDN11-205ENST00000480067 DOCK8Q8NF50 2099 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 GOLGA6L7A0A1B0GV03 622 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 GRID2IPA4D2P6 1211 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 C19orf67A6NJJ6 358 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 CYBBP04839 570 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 TNNT1P13805 278 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 TCF4P15884 667 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 IL1R2P27930 398 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 SCAPQ12770 1279 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 SMTNL2Q2TAL5 461 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 ODF2Q5BJF6 829 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 MS4A13Q5J8X5 152 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 TJAP1Q5JTD0 557 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 RAP1GAP2Q684P5 730 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 TRIM68Q6AZZ1 485 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 NADSYN1Q6IA69 706 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 LRRC31Q6UY01 552 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 TPGS1Q6ZTW0 290 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 PEX26Q7Z412 305 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 CHSY1Q86X52 802 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 CPNE8Q86YQ8 564 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 PSTKQ8IV42 348 aaKnown RBP11.58□□□□□ -0.55
CLDN11-205ENST00000480067 RHOT1Q8IXI2 618 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 LRRC57Q8N9N7 239 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 HSPH1Q92598 858 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 IRF7Q92985 503 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 OSBPL2Q9H1P3 480 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 EBF3Q9H4W6 596 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 OR12D3Q9UGF7 316 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.58□□□□□ -0.55
CLDN11-205ENST00000480067 HS3ST4Q9Y661 456 aa11.58□□□□□ -0.55
CLDN11-205ENST00000480067 DENND4AQ7Z401 1863 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 MUC3AQ02505 3323 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 F5H5T6 163 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 I6L893 689 aaPredicted RBP11.58□□□□□ -0.56
CLDN11-205ENST00000480067 TRDMT1O14717 391 aaKnown RBP11.58□□□□□ -0.56
CLDN11-205ENST00000480067 KIF5CO60282 957 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 TSPAN3O60637 253 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 SRGAP2O75044 1071 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 NFATC1O95644 943 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 ADH1CP00326 375 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 RARAP10276 462 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 TACR2P21452 398 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 GJC1P36383 396 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 TAS2R40P59535 323 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 SLC25A11Q02978 314 aaKnown RBP11.58□□□□□ -0.56
CLDN11-205ENST00000480067 TNK2Q07912 1038 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 NR1H3Q13133 447 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 AUHQ13825 339 aaKnown RBP11.58□□□□□ -0.56
CLDN11-205ENST00000480067 EML3Q32P44 896 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 FAM133BQ5BKY9 247 aaKnown RBP11.58□□□□□ -0.56
CLDN11-205ENST00000480067 PIK3R6Q5UE93 754 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 LRRC38Q5VT99 294 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 TXNRD3NBQ6F5E7 133 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 RFWD3Q6PCD5 774 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 POLNQ7Z5Q5 900 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 TMEM25Q86YD3 366 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 GJD3Q8N144 294 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 CPXM2Q8N436 756 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 KCTD6Q8NC69 237 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 TRIM58Q8NG06 486 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 CSGALNACT1Q8TDX6 532 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 DDI1Q8WTU0 396 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 TEKT4Q8WW24 435 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 TMA16Q96EY4 203 aaKnown RBP11.58□□□□□ -0.56
CLDN11-205ENST00000480067 ASIC4Q96FT7 647 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 PEBP4Q96S96 227 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 SNRNP25Q9BV90 132 aaKnown RBP11.58□□□□□ -0.56
CLDN11-205ENST00000480067 IRX2Q9BZI1 471 aaPredicted RBP11.58□□□□□ -0.56
CLDN11-205ENST00000480067 DHX35Q9H5Z1 703 aaKnown RBP11.58□□□□□ -0.56
CLDN11-205ENST00000480067 SPHK2Q9NRA0 654 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 AMFRQ9UKV5 643 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 VANGL2Q9ULK5 521 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 AP4E1Q9UPM8 1137 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 CAPN6Q9Y6Q1 641 aa11.58□□□□□ -0.56
CLDN11-205ENST00000480067 TYW5A2RUC4 315 aaKnown RBP11.57□□□□□ -0.56
CLDN11-205ENST00000480067 USP27XA6NNY8 438 aa11.57□□□□□ -0.56
CLDN11-205ENST00000480067 FTCDO95954 541 aa11.57□□□□□ -0.56
CLDN11-205ENST00000480067 ARSAP15289 507 aa11.57□□□□□ -0.56
CLDN11-205ENST00000480067 MSNP26038 577 aaKnown RBP11.57□□□□□ -0.56
CLDN11-205ENST00000480067 SLC6A4P31645 630 aa11.57□□□□□ -0.56
CLDN11-205ENST00000480067 L1CAMP32004 1257 aa11.57□□□□□ -0.56
CLDN11-205ENST00000480067 GGCXP38435 758 aa11.57□□□□□ -0.56
CLDN11-205ENST00000480067 VCPP55072 806 aaKnown RBP11.57□□□□□ -0.56
CLDN11-205ENST00000480067 PFKPQ01813 784 aa11.57□□□□□ -0.56
CLDN11-205ENST00000480067 RUNX3Q13761 415 aa11.57□□□□□ -0.56
CLDN11-205ENST00000480067 DHCR24Q15392 516 aa11.57□□□□□ -0.56
CLDN11-205ENST00000480067 ANO4Q32M45 955 aa11.57□□□□□ -0.56
CLDN11-205ENST00000480067 MPPE1Q53F39 396 aa11.57□□□□□ -0.56
CLDN11-205ENST00000480067 PPP6R3Q5H9R7 873 aaPredicted RBP11.57□□□□□ -0.56
CLDN11-205ENST00000480067 RABGAP1LQ5R372 815 aa11.57□□□□□ -0.56
CLDN11-205ENST00000480067 LY6G5CQ5SRR4 150 aa11.57□□□□□ -0.56
CLDN11-205ENST00000480067 FBXL22Q6P050 247 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms