RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 MYCLP1P12525 358 aaPredicted RBP21.81■■□□□ 1.08
SDF4-206ENST00000478938 ARRB2P32121 409 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 IDUAP35475 653 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 NSFP46459 744 aaKnown RBP21.81■■□□□ 1.08
SDF4-206ENST00000478938 HNRNPFP52597 415 aaKnown RBP21.81■■□□□ 1.08
SDF4-206ENST00000478938 SLC10A2Q12908 348 aaPredicted RBP21.81■■□□□ 1.08
SDF4-206ENST00000478938 PGS1Q32NB8 556 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 FAAH2Q6GMR7 532 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 RNF19BQ6ZMZ0 732 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 BPHLQ86WA6 291 aaPredicted RBP21.81■■□□□ 1.08
SDF4-206ENST00000478938 SNX32Q86XE0 403 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 MMAAQ8IVH4 418 aaKnown RBP21.81■■□□□ 1.08
SDF4-206ENST00000478938 CPSF7Q8N684 471 aaKnown RBP21.81■■□□□ 1.08
SDF4-206ENST00000478938 LILRB4Q8NHJ6 448 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 HOMER2Q9NSB8 354 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 DDX56Q9NY93 547 aaKnown RBP21.81■■□□□ 1.08
SDF4-206ENST00000478938 SYNPO2Q9UMS6 1093 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 SLC30A1Q9Y6M5 507 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 CNTNAP2Q9UHC6 1331 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 PIK3R2O00459 728 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 HTRA2O43464 458 aaPredicted RBP21.81■■□□□ 1.08
SDF4-206ENST00000478938 SEC24DO94855 1032 aaPredicted RBP21.81■■□□□ 1.08
SDF4-206ENST00000478938 MTX3Q5HYI7 312 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 MROH9Q5TGP6 573 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 TTC33Q6PID6 262 aaPredicted RBP21.81■■□□□ 1.08
SDF4-206ENST00000478938 DSG4Q86SJ6 1040 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 ADGRF2Q8IZF7 708 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 ZNF641Q96N77 438 aaPredicted RBP21.81■■□□□ 1.08
SDF4-206ENST00000478938 ANKRD60Q9BZ19 345 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 TRPV6Q9H1D0 765 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 POLR1BQ9H9Y6 1135 aa21.81■■□□□ 1.08
SDF4-206ENST00000478938 SNAP91O60641 907 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 GSRP00390 522 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 DPP6P42658 865 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 MAMLD1Q13495 774 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 SLC9A9Q8IVB4 645 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 GABPB2Q8TAK5 448 aaPredicted RBP21.8■■□□□ 1.08
SDF4-206ENST00000478938 SORT1Q99523 831 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 hCG_1818297A0A087WSY0 165 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 GOLGA8IPA6NC78 632 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 GOLGA8JA6NMD2 632 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 ZNF195O14628 629 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 TLR3O15455 904 aaKnown RBP21.8■■□□□ 1.08
SDF4-206ENST00000478938 C1QAP02745 245 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 CFHP08603 1231 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 ETFBP38117 255 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 NT5C2P49902 561 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 DPYSQ14117 519 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 PLA2G4FQ68DD2 849 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 CYP2U1Q7Z449 544 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 TPH2Q8IWU9 490 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 SIX6OS1Q8N1H7 587 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 OR7G1Q8NGA0 311 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 SLC35B2Q8TB61 432 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 MBOAT7Q96N66 472 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 ATP11BQ9Y2G3 1177 aa21.8■■□□□ 1.08
SDF4-206ENST00000478938 USP17L10C9JJH3 530 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 KCNH1O95259 989 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 ENO3P13929 434 aaPredicted RBP21.79■■□□□ 1.08
SDF4-206ENST00000478938 FAM47CQ5HY64 1035 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 MON1BQ7L1V2 547 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 KYQ8NBH2 561 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 DLG3Q92796 817 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 NACC2Q96BF6 587 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 PCDH12Q9NPG4 1184 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 SMYD2Q9NRG4 433 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 ZNF536O15090 1300 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 CYP3A7-CYP3A51PA0A087WV96 503 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 JRKO75564 520 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 BCAS2O75934 225 aaPredicted RBP21.79■■□□□ 1.08
SDF4-206ENST00000478938 CYP3A7P24462 503 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 MAP4P27816 1152 aaKnown RBP21.79■■□□□ 1.08
SDF4-206ENST00000478938 DSG3P32926 999 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 RFC1P35251 1148 aaPredicted RBP21.79■■□□□ 1.08
SDF4-206ENST00000478938 NR4A2P43354 598 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 DNASE1L3Q13609 305 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 C16orf89Q6UX73 402 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 FBXO33Q7Z6M2 555 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 CLIP4Q8N3C7 705 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 CALML6Q8TD86 181 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 P2RX7Q99572 595 aaKnown RBP21.79■■□□□ 1.08
SDF4-206ENST00000478938 SMARCAD1Q9H4L7 1026 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 BCAP29Q9UHQ4 241 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 SLC27A5Q9Y2P5 690 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 TRAF6Q9Y4K3 522 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 TEX264Q9Y6I9 313 aa21.79■■□□□ 1.08
SDF4-206ENST00000478938 UBE4BO95155 1302 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.78■■□□□ 1.08
SDF4-206ENST00000478938 SPAG6O75602 509 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 TSHRP16473 764 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 GNL1P36915 607 aaPredicted RBP21.78■■□□□ 1.08
SDF4-206ENST00000478938 HPCAL1P37235 193 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 ASPRV1Q53RT3 343 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 AGAP7PQ5VUJ5 663 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 KCNT2Q6UVM3 1135 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 STXBP4Q6ZWJ1 553 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 ATP6V0D2Q8N8Y2 350 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 ACTL9Q8TC94 416 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 LENG9Q96B70 501 aa21.78■■□□□ 1.08
SDF4-206ENST00000478938 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.78■■□□□ 1.086e-6■■■■□ 21.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms