RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 TWNKQ96RR1 684 aa12.37□□□□□ -0.43
PCCB-214ENST00000478469 ABCF3Q9NUQ8 709 aa12.37□□□□□ -0.43
PCCB-214ENST00000478469 LRCH4O75427 683 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 FECHP22830 423 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 CDC25CP30307 473 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 AKT1P31749 480 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 HSD17B3P37058 310 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 GYS2P54840 703 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 MMRN1Q13201 1228 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 FASTKD1Q53R41 847 aaKnown RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 TPGS1Q6ZTW0 290 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 WDR75Q8IWA0 830 aaKnown RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 MFN1Q8IWA4 741 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 FBXO36Q8NEA4 188 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 TMEM40Q8WWA1 233 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 STRA6Q9BX79 667 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 SCUBE2Q9NQ36 999 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 SAGE1Q9NXZ1 904 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 LAMB1P07942 1786 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 MYH9P35579 1960 aaKnown RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 A0A1W2PQH9 124 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 C2orf81A6NN90 581 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 DNALI1O14645 258 aaPredicted RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 SPAG7O75391 227 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 CHRNA1P02708 482 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 SNRPAP09012 282 aaKnown RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 HSPA1AP0DMV8 641 aaKnown RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 HSPA1BP0DMV9 641 aaKnown RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 GOT1P17174 413 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.36□□□□□ -0.43
PCCB-214ENST00000478469 CRLF3Q8IUI8 442 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 DENND1CQ8IV53 801 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 CCNYL1Q8N7R7 359 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 ZNF557Q8N988 423 aaPredicted RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 IRGQQ8WZA9 623 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 ALKBH8Q96BT7 664 aaKnown RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 FCRL2Q96LA5 508 aaPredicted RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 XPO6Q96QU8 1125 aaKnown RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 BCO2Q9BYV7 579 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 GMIPQ9P107 970 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 PTPRJQ12913 1337 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 ENPP3O14638 875 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 ZNF197O14709 1029 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 PAPSS1O43252 624 aaPredicted RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 DNAJC6O75061 913 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 ASMTLO95671 621 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 PFKMP08237 780 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 COL11A2P13942 1736 aaPredicted RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 SPATS2Q86XZ4 545 aaKnown RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 HDAC7Q8WUI4 952 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 ZMAT2Q96NC0 199 aaKnown RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 ZYG11BQ9C0D3 744 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 FAM8A1Q9UBU6 413 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 hCG_1818297A0A087WSY0 165 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 CFAP99D6REC4 459 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 FSCN2O14926 492 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 STBD1O95210 358 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 CHEK2O96017 543 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 HOXA11P31270 313 aaPredicted RBP12.36□□□□□ -0.43
PCCB-214ENST00000478469 AIF1P55008 147 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 SLC45A4Q5BKX6 768 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 AGMOQ6ZNB7 445 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 TRIM67Q6ZTA4 783 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 RFX8Q6ZV50 586 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 FAM47EQ6ZV65 393 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 NUDCD3Q8IVD9 361 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 FICDQ9BVA6 458 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 TRIM54Q9BYV2 358 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 PRDM12Q9H4Q4 367 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 COG5Q9UP83 839 aa12.36□□□□□ -0.43
PCCB-214ENST00000478469 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 LRPAP1P30533 357 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 PTK6Q13882 451 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 C16orf59Q7L2K0 433 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 PRELID2Q8N945 189 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 ANKRD7Q92527 254 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 TSPAN17Q96FV3 270 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 SALL4Q9UJQ4 1053 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 IQCF3P0C7M6 154 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 DAOAP59103 153 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 BEND6Q5SZJ8 279 aaPredicted RBP12.35□□□□□ -0.43
PCCB-214ENST00000478469 RIBC1Q8N443 379 aaPredicted RBP12.35□□□□□ -0.43
PCCB-214ENST00000478469 DQX1Q8TE96 717 aaKnown RBP12.35□□□□□ -0.43
PCCB-214ENST00000478469 TEKT4Q8WW24 435 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 C2orf49Q9BVC5 232 aaPredicted RBP12.35□□□□□ -0.43
PCCB-214ENST00000478469 ADGRE3Q9BY15 652 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 CDC42EP4Q9H3Q1 356 aaKnown RBP12.35□□□□□ -0.43
PCCB-214ENST00000478469 UBA2Q9UBT2 640 aaPredicted RBP12.35□□□□□ -0.43
PCCB-214ENST00000478469 PTPN9P43378 593 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 RPL21P46778 160 aaKnown RBP12.35□□□□□ -0.43
PCCB-214ENST00000478469 STX1BP61266 288 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 LRRC14Q15048 493 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 ASTE1Q2TB18 679 aaPredicted RBP12.35□□□□□ -0.43
PCCB-214ENST00000478469 ZRANB3Q5FWF4 1079 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 MAP3K21Q5TCX8 1036 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 STMN2Q93045 179 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 TMEM175Q9BSA9 504 aa12.35□□□□□ -0.43
PCCB-214ENST00000478469 C11orf84Q9BUA3 381 aaPredicted RBP12.35□□□□□ -0.43
PCCB-214ENST00000478469 PCDH18Q9HCL0 1135 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms