RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 LCLAT1Q6UWP7 414 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 SERPINA13PQ6UXR4 307 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 ADIPOR2Q86V24 386 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 CACUL1Q86Y37 369 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRIM13-208ENST00000478111 SLC35F5Q8WV83 523 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 ERCC4Q92889 916 aaPredicted RBP17.43■□□□□ 0.38
TRIM13-208ENST00000478111 NUP58Q9BVL2 599 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 ZDHHC5Q9C0B5 715 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 CNGB3Q9NQW8 809 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 ABCC13Q9NSE7 274 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 ARMCX3Q9UH62 379 aaPredicted RBP17.43■□□□□ 0.38
TRIM13-208ENST00000478111 KIAA1257Q9ULG3 409 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 MEI4A8MW99 385 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 RNF225M0QZC1 329 aaPredicted RBP17.42■□□□□ 0.38
TRIM13-208ENST00000478111 MSI1O43347 362 aaKnown RBP17.42■□□□□ 0.38
TRIM13-208ENST00000478111 CBFA2T3O75081 653 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 LATS1O95835 1130 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 SETSIPP0DME0 302 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 YWHAEP62258 255 aaKnown RBP17.42■□□□□ 0.38
TRIM13-208ENST00000478111 ZNF423Q2M1K9 1284 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 PMF1Q6P1K2 205 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 MSANTD2Q6P1R3 559 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 NAXDQ8IW45 347 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 OR2T3Q8NH03 318 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 RNF139Q8WU17 664 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 CYB5D2Q8WUJ1 264 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 TMA16Q96EY4 203 aaKnown RBP17.42■□□□□ 0.38
TRIM13-208ENST00000478111 IPO9Q96P70 1041 aaKnown RBP17.42■□□□□ 0.38
TRIM13-208ENST00000478111 TSG101Q99816 390 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 MIR1-1HGQ9H1L0 117 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 IL21RQ9HBE5 538 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 SLCO1B1Q9Y6L6 691 aa17.42■□□□□ 0.38
TRIM13-208ENST00000478111 BAHCC1Q9P281 2608 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 ACACAQ13085 2346 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 BCAT2O15382 392 aaPredicted RBP17.41■□□□□ 0.38
TRIM13-208ENST00000478111 IGLV3-27P01718 113 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 ACADMP11310 421 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 LCP1P13796 627 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 TBXAS1P24557 533 aaPredicted RBP17.41■□□□□ 0.38
TRIM13-208ENST00000478111 FMO5P49326 533 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 RGS7P49802 495 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 ZNF445P59923 1031 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 LRRC63Q05C16 580 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 CHST9Q7L1S5 443 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 SIX6OS1Q8N1H7 587 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 ZNF366Q8N895 744 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 LMO3Q8TAP4 145 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 WFDC5Q8TCV5 224 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 WFIKKN2Q8TEU8 576 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 ZCCHC14Q8WYQ9 949 aaKnown RBP17.41■□□□□ 0.38
TRIM13-208ENST00000478111 KAT5Q92993 513 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 CCDC34Q96HJ3 373 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 ABCB8Q9NUT2 735 aa17.41■□□□□ 0.38
TRIM13-208ENST00000478111 EIF2B4Q9UI10 523 aaKnown RBP17.41■□□□□ 0.38
TRIM13-208ENST00000478111 TP53BP1Q12888 1972 aaPredicted RBP17.4■□□□□ 0.38
TRIM13-208ENST00000478111 GOLGA4Q13439 2230 aaKnown RBP17.4■□□□□ 0.38
TRIM13-208ENST00000478111 APC2O95996 2303 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 GOLGA6L7A0A1B0GV03 622 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 PIK3R2O00459 728 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 PMM2O15305 246 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 PAEPP09466 180 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 FTH1P19P0C7X4 201 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 SLC6A4P31645 630 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 ACSL1P33121 698 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 CNGA2Q16280 664 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 FAM133BQ5BKY9 247 aaKnown RBP17.4■□□□□ 0.38
TRIM13-208ENST00000478111 PIK3R6Q5UE93 754 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 TMEM270Q6UE05 265 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 DBX2Q6ZNG2 339 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 FAM124AQ86V42 546 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 CLEC4CQ8WTT0 213 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 ADAMTS14Q8WXS8 1223 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 IRGQQ8WZA9 623 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 LMLNQ96KR4 655 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 PCED1AQ9H1Q7 454 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 C6orf106Q9H6K1 298 aaPredicted RBP17.4■□□□□ 0.38
TRIM13-208ENST00000478111 GAREM1Q9H706 876 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 PRSS16Q9NQE7 514 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 GGA2Q9UJY4 613 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 PCOLCE2Q9UKZ9 415 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 PLA2G4CQ9UP65 541 aa17.4■□□□□ 0.38
TRIM13-208ENST00000478111 TAF4O00268 1085 aa17.39■□□□□ 0.37
TRIM13-208ENST00000478111 CALCAP01258 141 aa17.39■□□□□ 0.37
TRIM13-208ENST00000478111 FYNP06241 537 aa17.39■□□□□ 0.37
TRIM13-208ENST00000478111 ZNF883P0CG24 379 aa17.39■□□□□ 0.37
TRIM13-208ENST00000478111 PABPC1P11940 636 aaKnown RBP17.39■□□□□ 0.37
TRIM13-208ENST00000478111 CD44P16070 742 aaKnown RBP17.39■□□□□ 0.37
TRIM13-208ENST00000478111 CD70P32970 193 aa17.39■□□□□ 0.37
TRIM13-208ENST00000478111 RDXP35241 583 aaKnown RBP17.39■□□□□ 0.37
TRIM13-208ENST00000478111 RPS14P62263 151 aaKnown RBP17.39■□□□□ 0.37
TRIM13-208ENST00000478111 ARID5AQ03989 594 aa17.39■□□□□ 0.37
TRIM13-208ENST00000478111 HLA-BQ31612 363 aa17.39■□□□□ 0.37
TRIM13-208ENST00000478111 FNDC3BQ53EP0 1204 aaKnown RBP17.39■□□□□ 0.37
TRIM13-208ENST00000478111 MPP7Q5T2T1 576 aa17.39■□□□□ 0.37
TRIM13-208ENST00000478111 MBLAC2Q68D91 279 aa17.39■□□□□ 0.37
TRIM13-208ENST00000478111 RFWD3Q6PCD5 774 aa17.39■□□□□ 0.37
TRIM13-208ENST00000478111 GLRX5Q86SX6 157 aa17.39■□□□□ 0.37
TRIM13-208ENST00000478111 SLCO6A1Q86UG4 719 aa17.39■□□□□ 0.37
TRIM13-208ENST00000478111 AHI1Q8N157 1196 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms