RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 NGEFQ8N5V2 710 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 TMEM171Q8WVE6 324 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 OSCP1Q8WVF1 389 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 R3HDM4Q96D70 268 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 CLMNQ96JQ2 1002 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 DUSP22Q9NRW4 184 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 ZMYND8Q9ULU4 1186 aaPredicted RBP5.48□□□□□ -1.53
VPS50-214ENST00000477935 SCAF8Q9UPN6 1271 aaKnown RBP5.48□□□□□ -1.53
VPS50-214ENST00000477935 SNX14Q9Y5W7 946 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 WNT6Q9Y6F9 365 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 EYSQ5T1H1 3165 aa5.48□□□□□ -1.53
VPS50-214ENST00000477935 COL1A1P02452 1464 aaPredicted RBP5.47□□□□□ -1.53
VPS50-214ENST00000477935 ZNF646O15015 1829 aaPredicted RBP5.47□□□□□ -1.53
VPS50-214ENST00000477935 CCL15-CCL14A0A0B4J2E2 113 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 RASSF9O75901 435 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 FAM163BP0C2L3 166 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 CETPP11597 493 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 FOSL2P15408 326 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 CD38P28907 300 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 PDE1AP54750 535 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 PROK1P58294 105 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 RPS8P62241 208 aaKnown RBP5.47□□□□□ -1.53
VPS50-214ENST00000477935 CCL15Q16663 113 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 SYCE2Q6PIF2 218 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 C17orf99Q6UX52 265 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 WDR53Q7Z5U6 358 aaPredicted RBP5.47□□□□□ -1.53
VPS50-214ENST00000477935 IZUMO1Q8IYV9 350 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 XAGE5Q8WWM1 108 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 SOCS4Q8WXH5 440 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 BRI3BPQ8WY22 251 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 PPP2R3CQ969Q6 453 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 TTC17Q96AE7 1141 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 OPTNQ96CV9 577 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 DEFB118Q96PH6 123 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 STK31Q9BXU1 1019 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 ARHGAP39Q9C0H5 1083 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 TRMT13Q9NUP7 481 aaKnown RBP5.47□□□□□ -1.53
VPS50-214ENST00000477935 DLL3Q9NYJ7 618 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 SH3TC1Q8TE82 1336 aa5.47□□□□□ -1.53
VPS50-214ENST00000477935 MUC6Q6W4X9 2439 aa5.46□□□□□ -1.53
VPS50-214ENST00000477935 LOC102723971A0A1B0GUV8 181 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 H7C4K7 107 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 MASP2O00187 686 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 CCP110O43303 1012 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 HNRNPCP07910 306 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS50-214ENST00000477935 ENGP17813 658 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 EEFSECP57772 596 aaKnown RBP5.46□□□□□ -1.54
VPS50-214ENST00000477935 LY6KQ17RY6 165 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 INSCQ1MX18 579 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 PTCHD3Q3KNS1 767 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 AARS2Q5JTZ9 985 aaKnown RBP5.46□□□□□ -1.54
VPS50-214ENST00000477935 CEP85Q6P2H3 762 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 ZNF788Q6ZQV5 615 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 SPARTQ8N0X7 666 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 RP9Q8TA86 221 aaKnown RBP5.46□□□□□ -1.54
VPS50-214ENST00000477935 MSLNLQ96KJ4 702 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 ASB2Q96Q27 587 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 LBHD1Q9BQE6 289 aaPredicted RBP5.46□□□□□ -1.54
VPS50-214ENST00000477935 APOL5Q9BWW9 433 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 BTBD1Q9H0C5 482 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 DNMT3BQ9UBC3 853 aaKnown RBP5.46□□□□□ -1.54
VPS50-214ENST00000477935 TRMT112Q9UI30 125 aaKnown RBP5.46□□□□□ -1.54
VPS50-214ENST00000477935 PADI4Q9UM07 663 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 RRP7AQ9Y3A4 280 aaKnown RBP5.46□□□□□ -1.54
VPS50-214ENST00000477935 CDY1Q9Y6F8 540 aa5.46□□□□□ -1.54
VPS50-214ENST00000477935 QSOX1O00391 747 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 ZNF213O14771 459 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 HTATSF1O43719 755 aaKnown RBP5.45□□□□□ -1.54
VPS50-214ENST00000477935 UFL1O94874 794 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 VNN1O95497 513 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 IL1R1P14778 569 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 C21orf58P58505 322 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 MRPS5P82675 430 aaKnown RBP5.45□□□□□ -1.54
VPS50-214ENST00000477935 TAF7Q15545 349 aaPredicted RBP5.45□□□□□ -1.54
VPS50-214ENST00000477935 CERCAMQ5T4B2 595 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 CACHD1Q5VU97 1274 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 SLC9A4Q6AI14 798 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 Q6ZWC4 215 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 SLC29A4Q7RTT9 530 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 KCTD20Q7Z5Y7 419 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 CAND1Q86VP6 1230 aaKnown RBP5.45□□□□□ -1.54
VPS50-214ENST00000477935 TBC1D5Q92609 795 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 CELF1Q92879 486 aaKnown RBP5.45□□□□□ -1.54
VPS50-214ENST00000477935 ZBED3Q96IU2 234 aaPredicted RBP5.45□□□□□ -1.54
VPS50-214ENST00000477935 C8orf48Q96LL4 319 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 C17orf80Q9BSJ5 609 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 NUP62CLQ9H1M0 184 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 C11orf49Q9H6J7 331 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 SERGEFQ9UGK8 458 aa5.45□□□□□ -1.54
VPS50-214ENST00000477935 TARM1B6A8C7 271 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 RRP9O43818 475 aaKnown RBP5.44□□□□□ -1.54
VPS50-214ENST00000477935 SRGAP2O75044 1071 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 RASAL1O95294 804 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 TXNP10599 105 aaKnown RBP5.44□□□□□ -1.54
VPS50-214ENST00000477935 MYL6BP14649 208 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 RPL17P18621 184 aaKnown RBP5.44□□□□□ -1.54
VPS50-214ENST00000477935 CTGFP29279 349 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 PTDSS1P48651 473 aaKnown RBP5.44□□□□□ -1.54
VPS50-214ENST00000477935 TPTEP56180 551 aa5.44□□□□□ -1.54
VPS50-214ENST00000477935 CCNIQ14094 377 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms