RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 STRIP2Q9ULQ0 834 aa21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 PLA2G4CQ9UP65 541 aa21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 A0A1W2PPC4 97 aa21.17■□□□□ 0.98
PDLIM1-202ENST00000477757 CYSRT1A8MQ03 144 aa21.17■□□□□ 0.98
PDLIM1-202ENST00000477757 YKT6O15498 198 aa21.17■□□□□ 0.98
PDLIM1-202ENST00000477757 ITGAVP06756 1048 aa21.17■□□□□ 0.98
PDLIM1-202ENST00000477757 ABCB4P21439 1286 aa21.17■□□□□ 0.98
PDLIM1-202ENST00000477757 MPPE1Q53F39 396 aa21.17■□□□□ 0.98
PDLIM1-202ENST00000477757 ZNF776Q68DI1 518 aaPredicted RBP21.17■□□□□ 0.98
PDLIM1-202ENST00000477757 SPOPLQ6IQ16 392 aa21.17■□□□□ 0.98
PDLIM1-202ENST00000477757 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.17■□□□□ 0.98
PDLIM1-202ENST00000477757 FGF11Q92914 225 aa21.17■□□□□ 0.98
PDLIM1-202ENST00000477757 PLD4Q96BZ4 506 aa21.17■□□□□ 0.98
PDLIM1-202ENST00000477757 PPP4R2Q9NY27 417 aa21.17■□□□□ 0.98
PDLIM1-202ENST00000477757 ERVH48-1M5A8F1 160 aa21.16■□□□□ 0.98
PDLIM1-202ENST00000477757 BRINP1O60477 761 aa21.16■□□□□ 0.98
PDLIM1-202ENST00000477757 USP30Q70CQ3 517 aa21.16■□□□□ 0.98
PDLIM1-202ENST00000477757 UNC13DQ70J99 1090 aa21.16■□□□□ 0.98
PDLIM1-202ENST00000477757 CHST9Q7L1S5 443 aa21.16■□□□□ 0.98
PDLIM1-202ENST00000477757 ADIPOR2Q86V24 386 aa21.16■□□□□ 0.98
PDLIM1-202ENST00000477757 GOLGA5Q8TBA6 731 aa21.16■□□□□ 0.98
PDLIM1-202ENST00000477757 SKA1Q96BD8 255 aa21.16■□□□□ 0.98
PDLIM1-202ENST00000477757 TMEM176AQ96HP8 235 aa21.16■□□□□ 0.98
PDLIM1-202ENST00000477757 USP28Q96RU2 1077 aa21.16■□□□□ 0.98
PDLIM1-202ENST00000477757 NT5C1AQ9BXI3 368 aa21.16■□□□□ 0.98
PDLIM1-202ENST00000477757 DUSP16Q9BY84 665 aa21.16■□□□□ 0.98
PDLIM1-202ENST00000477757 COL6A6A6NMZ7 2263 aa21.16■□□□□ 0.98
PDLIM1-202ENST00000477757 SLC12A8A0AV02 714 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 WNT1P04628 370 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 NEFLP07196 543 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 DLDP09622 509 aaKnown RBP21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 PDCP20941 246 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 EPHA8P29322 1005 aaPredicted RBP21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 DLG4P78352 724 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 ILKQ13418 452 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 KNOP1Q1ED39 458 aaKnown RBP21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 C8orf34Q49A92 452 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 PRAMEF14Q5SWL7 426 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 RSRC2Q7L4I2 434 aaKnown RBP21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 KIAA0907Q7Z7F0 614 aaPredicted RBP21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 ERICH1Q86X53 443 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 SPACA3Q8IXA5 215 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 ZC3H3Q8IXZ2 948 aaKnown RBP21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 AHI1Q8N157 1196 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 ARHGAP18Q8N392 663 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 EID2Q8N6I1 236 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 ARID3AQ99856 593 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 C7orf25Q9BPX7 421 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 PABPC3Q9H361 631 aaKnown RBP21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 ABCB8Q9NUT2 735 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 GGA2Q9UJY4 613 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 SCML1Q9UN30 329 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 MYLKQ15746 1914 aa21.15■□□□□ 0.98
PDLIM1-202ENST00000477757 KIF20AO95235 890 aa21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 ACTN2P35609 894 aa21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 PIK3CAP42336 1068 aa21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 ZNF445P59923 1031 aa21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 CXADRP78310 365 aa21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 TRIP4Q15650 581 aaPredicted RBP21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 TBC1D25Q3MII6 688 aa21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 SV2AQ7L0J3 742 aa21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 CACTIN-AS1Q8N1I8 211 aa21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 RFFLQ8WZ73 363 aa21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 DHX58Q96C10 678 aa21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 BACH2Q9BYV9 841 aa21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 RSPH9Q9H1X1 276 aaPredicted RBP21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 GDF3Q9NR23 364 aa21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 NCKAP1Q9Y2A7 1128 aa21.14■□□□□ 0.97
PDLIM1-202ENST00000477757 C10orf142B7Z368 130 aa21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 PABPC1P11940 636 aaKnown RBP21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 ARRB1P49407 418 aaPredicted RBP21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 YWHAGP61981 247 aaKnown RBP eCLIP21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 CCDC173Q0VFZ6 552 aa21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 PPP1R26Q5T8A7 1209 aaPredicted RBP21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 SFMBT2Q5VUG0 894 aa21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 TMEM174Q8WUU8 243 aa21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 EBF2Q9HAK2 575 aa21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 CYP3A43Q9HB55 503 aa21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 SLC39A2Q9NP94 309 aa21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 DMAC2Q9NW81 257 aa21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 STOML2Q9UJZ1 356 aa21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 SPTA1P02549 2419 aa21.13■□□□□ 0.97
PDLIM1-202ENST00000477757 A0A1W2PR77 199 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 FAM47DPA6NHR8 397 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 HLA-DRAP01903 254 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 ATP5BP06576 529 aaKnown RBP21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 CD38P28907 300 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 NASPP49321 788 aaPredicted RBP21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 GALCP54803 685 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 MBLAC2Q68D91 279 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 NCEH1Q6PIU2 408 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 SLC9A9Q8IVB4 645 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 DCBLD1Q8N8Z6 715 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 IQUBQ8NA54 791 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 TMC2Q8TDI7 906 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 WBP1Q96G27 269 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 AASDHPPTQ9NRN7 309 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 FBXL12Q9NXK8 326 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 SERGEFQ9UGK8 458 aa21.12■□□□□ 0.97
PDLIM1-202ENST00000477757 SUN2Q9UH99 717 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms