RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 PPP2CAP67775 309 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 SATB1Q01826 763 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 SRSF5Q13243 272 aaKnown RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 TUSC3Q13454 348 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 MXD4Q14582 209 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 FAM187BQ17R55 369 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 PABPC1LQ4VXU2 614 aaKnown RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 FAM78AQ5JUQ0 283 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 GLRA4Q5JXX5 417 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 PPM1LQ5SGD2 360 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 ZBTB41Q5SVQ8 909 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 ACBD5Q5T8D3 534 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 STEAP3Q658P3 488 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 CDCA2Q69YH5 1023 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 VITQ6UXI7 678 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 PIK3AP1Q6ZUJ8 805 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 MTSS1LQ765P7 747 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 RUFY3Q7L099 469 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 MAEAQ7L5Y9 396 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 NEK8Q86SG6 692 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 CEP57Q86XR8 500 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 NT5DC4Q86YG4 428 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 KLHL36Q8N4N3 616 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 TCP11Q8WWU5 503 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 ANAPC16Q96DE5 110 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 ZNF274Q96GC6 653 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 PPP1R10Q96QC0 940 aaKnown RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 KIFC3Q9BVG8 833 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 C22orf23Q9BZE7 217 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 POLR3FQ9H1D9 316 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 SLKQ9H2G2 1235 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 EPB41L1Q9H4G0 881 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 DTLQ9NZJ0 730 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 NCDNQ9UBB6 729 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 MTRRQ9UBK8 725 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 DPP7Q9UHL4 492 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 CROTQ9UKG9 612 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 CDY1Q9Y6F8 540 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 ACACAQ13085 2346 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 HELZP42694 1942 aaKnown RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 HELZ2Q9BYK8 2649 aaKnown RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 ASXL3Q9C0F0 2248 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 CCDC194A0A1B0GVG4 234 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 ARHGEF37A1IGU5 675 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 WDR27A2RRH5 827 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 LRRIQ4A6NIV6 560 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 PATE3B3GLJ2 98 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 TMEM189-UBE2V1I3L0A0 370 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 K7ESF4 209 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 USO1O60763 962 aaKnown RBP5.02□□□□□ -1.61
CKS1B-207ENST00000477676 MED24O75448 989 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 ABLIM3O94929 683 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 LARGE1O95461 756 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 THP07101 528 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 CHRNB1P11230 501 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 GCFC2P16383 781 aaKnown RBP5.02□□□□□ -1.61
CKS1B-207ENST00000477676 GJA1P17302 382 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 FPR2P25090 351 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 BCL6P41182 706 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 VIPR2P41587 438 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 CLCNKBP51801 687 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 ROR1Q01973 937 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 ADCY1Q08828 1119 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 HNRNPA0Q13151 305 aaKnown RBP5.02□□□□□ -1.61
CKS1B-207ENST00000477676 PCBP1Q15365 356 aaKnown RBP eCLIP5.02□□□□□ -1.61
CKS1B-207ENST00000477676 UPP1Q16831 310 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 LIN9Q5TKA1 542 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 GALNT17Q6IS24 598 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 ALKAL1Q6UXT8 129 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 OTUD6AQ7L8S5 288 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 EXOC8Q8IYI6 725 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 FRS2Q8WU20 508 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 ATRIPQ8WXE1 791 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 ELSPBP1Q96BH3 223 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 ZMAT2Q96NC0 199 aaKnown RBP5.02□□□□□ -1.61
CKS1B-207ENST00000477676 LRRC3BQ96PB8 259 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 MTMR9Q96QG7 549 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 TRIM6Q9C030 488 aaPredicted RBP5.02□□□□□ -1.61
CKS1B-207ENST00000477676 ZNF334Q9HCZ1 680 aaPredicted RBP5.02□□□□□ -1.61
CKS1B-207ENST00000477676 RXFP3Q9NSD7 469 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 RBM12Q9NTZ6 932 aaKnown RBP5.02□□□□□ -1.61
CKS1B-207ENST00000477676 ANKEF1Q9NU02 776 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 CEP72Q9P209 647 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 TPCN1Q9ULQ1 816 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 USP18Q9UMW8 372 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 NDRG2Q9UN36 371 aaKnown RBP5.02□□□□□ -1.61
CKS1B-207ENST00000477676 GDAQ9Y2T3 454 aa5.02□□□□□ -1.61
CKS1B-207ENST00000477676 MRPS23Q9Y3D9 190 aaKnown RBP5.02□□□□□ -1.61
CKS1B-207ENST00000477676 GOLGA4Q13439 2230 aaKnown RBP5.01□□□□□ -1.61
CKS1B-207ENST00000477676 CABIN1Q9Y6J0 2220 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 PLXND1Q9Y4D7 1925 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 STK36Q9NRP7 1315 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 FLNBO75369 2602 aaKnown RBP5.01□□□□□ -1.61
CKS1B-207ENST00000477676 APC2O95996 2303 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 SMIM28A0A1B0GU29 152 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 PRR5-ARHGAP8B1AHC4 643 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 SLC30A4O14863 429 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 PFKFB2O60825 505 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 DKC1O60832 514 aaKnown RBP eCLIP5.01□□□□□ -1.61
CKS1B-207ENST00000477676 RECKO95980 971 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms