RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 GBP1P32455 592 aa22.59■■□□□ 1.21
COL9A3-211ENST00000477612 IL12RB1P42701 662 aa22.59■■□□□ 1.21
COL9A3-211ENST00000477612 RAPGEF1Q13905 1077 aa22.59■■□□□ 1.21
COL9A3-211ENST00000477612 OLFML1Q6UWY5 402 aa22.59■■□□□ 1.21
COL9A3-211ENST00000477612 ZNF397Q8NF99 534 aaPredicted RBP22.59■■□□□ 1.21
COL9A3-211ENST00000477612 ADAM32Q8TC27 787 aa22.59■■□□□ 1.21
COL9A3-211ENST00000477612 DDX1Q92499 740 aaKnown RBP22.59■■□□□ 1.21
COL9A3-211ENST00000477612 SPACA7Q96KW9 195 aa22.59■■□□□ 1.21
COL9A3-211ENST00000477612 GANQ9H2C0 597 aa22.59■■□□□ 1.21
COL9A3-211ENST00000477612 VPS45Q9NRW7 570 aa22.59■■□□□ 1.21
COL9A3-211ENST00000477612 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.59■■□□□ 1.21
COL9A3-211ENST00000477612 LIMA1Q9UHB6 759 aaKnown RBP22.59■■□□□ 1.21
COL9A3-211ENST00000477612 MBD1Q9UIS9 605 aaPredicted RBP22.59■■□□□ 1.21
COL9A3-211ENST00000477612 CEP83Q9Y592 693 aa22.59■■□□□ 1.21
COL9A3-211ENST00000477612 CACNA1AO00555 2505 aa22.59■■□□□ 1.21
COL9A3-211ENST00000477612 LAMA1P25391 3075 aa22.59■■□□□ 1.21
COL9A3-211ENST00000477612 HSF2BPO75031 334 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 C7P10643 843 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 NDUFV2P19404 249 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 MPLP40238 635 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 GABRB2P47870 512 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 MYL5Q02045 173 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 ZNF234Q14588 700 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 NCAPHQ15003 741 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 PTPN20Q4JDL3 420 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 RFWD3Q6PCD5 774 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 FAM183BPQ6ZVS7 135 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 SLC26A9Q7LBE3 791 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 METTL3Q86U44 580 aaKnown RBP22.58■■□□□ 1.21
COL9A3-211ENST00000477612 ZDHHC17Q8IUH5 632 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 DEFB106AQ8N104 65 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 PGBD3Q8N328 593 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 NETO1Q8TDF5 533 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 RLN3Q8WXF3 142 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 LMLNQ96KR4 655 aa22.58■■□□□ 1.21
COL9A3-211ENST00000477612 GON4LQ3T8J9 2241 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 F8VZ95 297 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 ZBTB24O43167 697 aaPredicted RBP22.57■■□□□ 1.2
COL9A3-211ENST00000477612 ZNF217O75362 1048 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 ERBB2P04626 1255 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 TPM2P07951 284 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 ZNF18P17022 549 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 PITX1P78337 314 aaPredicted RBP22.57■■□□□ 1.2
COL9A3-211ENST00000477612 FOXK2Q01167 660 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 SLC6A3Q01959 620 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 DCAF6Q58WW2 860 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 MS4A13Q5J8X5 152 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 ADIPOR2Q86V24 386 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 FRMD1Q8N878 549 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 TMEM35BQ8NCS4 154 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 FIBINQ8TAL6 211 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 BTN2A3PQ96KV6 586 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 MRGPRX1Q96LB2 322 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 PRICKLE1Q96MT3 831 aaPredicted RBP22.57■■□□□ 1.2
COL9A3-211ENST00000477612 RTKNQ9BST9 563 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 HSD3B7Q9H2F3 369 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 TMEM63CQ9P1W3 806 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 CALCOCO1Q9P1Z2 691 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 RAD54BQ9Y620 910 aa22.57■■□□□ 1.2
COL9A3-211ENST00000477612 KCNU1A8MYU2 1149 aa22.56■■□□□ 1.2
COL9A3-211ENST00000477612 TBL1XO60907 577 aa22.56■■□□□ 1.2
COL9A3-211ENST00000477612 PABPC1P11940 636 aaKnown RBP22.56■■□□□ 1.2
COL9A3-211ENST00000477612 COPB1P53618 953 aaKnown RBP22.56■■□□□ 1.2
COL9A3-211ENST00000477612 LIMK1P53667 647 aa22.56■■□□□ 1.2
COL9A3-211ENST00000477612 ATXN1P54253 815 aaKnown RBP22.56■■□□□ 1.2
COL9A3-211ENST00000477612 CDK17Q00537 523 aa22.56■■□□□ 1.2
COL9A3-211ENST00000477612 ZC3H12AQ5D1E8 599 aaKnown RBP22.56■■□□□ 1.2
COL9A3-211ENST00000477612 OR6B2Q6IFH4 312 aa22.56■■□□□ 1.2
COL9A3-211ENST00000477612 SLC36A4Q6YBV0 504 aa22.56■■□□□ 1.2
COL9A3-211ENST00000477612 AHI1Q8N157 1196 aa22.56■■□□□ 1.2
COL9A3-211ENST00000477612 HJURPQ8NCD3 748 aaPredicted RBP22.56■■□□□ 1.2
COL9A3-211ENST00000477612 WFDC5Q8TCV5 224 aa22.56■■□□□ 1.2
COL9A3-211ENST00000477612 MYEOVQ96EZ4 313 aa22.56■■□□□ 1.2
COL9A3-211ENST00000477612 NUCKS1Q9H1E3 243 aaKnown RBP22.56■■□□□ 1.2
COL9A3-211ENST00000477612 ABCB8Q9NUT2 735 aa22.56■■□□□ 1.2
COL9A3-211ENST00000477612 GGA2Q9UJY4 613 aa22.56■■□□□ 1.2
COL9A3-211ENST00000477612 SIK3Q9Y2K2 1263 aa22.56■■□□□ 1.2
COL9A3-211ENST00000477612 CAVIN2O95810 425 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 APOEP02649 317 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 NOS2P35228 1153 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 SCNN1AP37088 669 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 JAM2P57087 298 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 CREB5Q02930 508 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 STARD3Q14849 445 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 FUT11Q495W5 492 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 FKBP15Q5T1M5 1219 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 CHST9Q7L1S5 443 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 LPCAT2Q7L5N7 544 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 APTXQ7Z2E3 356 aaKnown RBP22.55■■□□□ 1.2
COL9A3-211ENST00000477612 NOP9Q86U38 636 aaKnown RBP22.55■■□□□ 1.2
COL9A3-211ENST00000477612 ZNF677Q86XU0 584 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 ATP6V0D2Q8N8Y2 350 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 EPS8L1Q8TE68 723 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 CIPCQ9C0C6 399 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 TMEM245Q9H330 911 aa22.55■■□□□ 1.2
COL9A3-211ENST00000477612 XPO7Q9UIA9 1087 aaKnown RBP22.55■■□□□ 1.2
COL9A3-211ENST00000477612 CDV3Q9UKY7 258 aaKnown RBP22.55■■□□□ 1.2
COL9A3-211ENST00000477612 IGHV1OR15-9A0A0B4J2B8 117 aa22.54■■□□□ 1.2
COL9A3-211ENST00000477612 TYW5A2RUC4 315 aaKnown RBP22.54■■□□□ 1.2
COL9A3-211ENST00000477612 SLC30A4O14863 429 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms