RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 OR6C75A6NL08 312 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 SMIM23A6NLE4 172 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 TMEM63AO94886 807 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 LRIG2O94898 1065 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 IGLV3-25P01717 112 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 ITGAVP06756 1048 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 CXCR3P49682 368 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 OLIG2Q13516 323 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 EIF4EBP2Q13542 120 aaPredicted RBP12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 TTMPQ5BVD1 217 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 ARHGAP36Q6ZRI8 547 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 ANKS3Q6ZW76 656 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 PBXIP1Q96AQ6 731 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 ZNF558Q96NG5 402 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 TRIM56Q9BRZ2 755 aaKnown RBP12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 ZNF670Q9BS34 389 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 IL23AQ9NPF7 189 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 MPP6Q9NZW5 540 aa12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 SPTBN5Q9NRC6 3674 aaKnown RBP12.23□□□□□ -0.45
TNRC6A-206ENST00000477487 EEF2KO00418 725 aaKnown RBP12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 IRAK2O43187 625 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 AVILO75366 819 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 ACSL3O95573 720 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 ERCC2P18074 760 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 DRG2P55039 364 aaKnown RBP12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 SEMA3BQ13214 749 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 DPYSQ14117 519 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 TMEM240Q5SV17 173 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 RFX8Q6ZV50 586 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 RSAD2Q8WXG1 361 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 WBP2Q969T9 261 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 TMEM169Q96HH4 297 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 C8orf48Q96LL4 319 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 WDR83Q9BRX9 315 aaKnown RBP12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 OR12D3Q9UGF7 316 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 NEU3Q9UQ49 428 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 ERICH4A6NGS2 130 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 MCF2LO15068 1137 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 PAGE1O75459 146 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 GJB5O95377 273 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 NNTQ13423 1086 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 SLC29A2Q14542 456 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 KYNUQ16719 465 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 DNAJC21Q5F1R6 531 aaKnown RBP12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 EFHC2Q5JST6 749 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 SLC8B1Q6J4K2 584 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 DRICH1Q6PGQ1 229 aaPredicted RBP12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 CIR1Q86X95 450 aaPredicted RBP12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 MAP7D3Q8IWC1 876 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 CPT1BQ92523 772 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 FUBP3Q96I24 572 aaKnown RBP eCLIP12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 PNPLA8Q9NP80 782 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 SCML2Q9UQR0 700 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 EFR3BQ9Y2G0 817 aa12.22□□□□□ -0.45
TNRC6A-206ENST00000477487 PRRC2BQ5JSZ5 2229 aaKnown RBP12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 GOLGA6L7A0A1B0GV03 622 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 SLC38A8A6NNN8 435 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 KCNK1O00180 336 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 PPFIA2O75334 1257 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 METTL18O95568 372 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 SOD2P04179 222 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 DNAJB1P25685 340 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 YWHAQP27348 245 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 GRIA1P42261 906 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 CALCOCO2Q13137 446 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 FNBP1LQ5T0N5 605 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 CFAP58Q5T655 872 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 RNASEH2BQ5TBB1 312 aaKnown RBP12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 HIBCHQ6NVY1 386 aaPredicted RBP12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 VSTM1Q6UX27 236 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 AGGF1Q8N302 714 aaeCLIP12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 TTC16Q8NEE8 873 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 GRK7Q8WTQ7 553 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 CENPHQ9H3R5 247 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 CYP4F11Q9HBI6 524 aa12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 DRG1Q9Y295 367 aaKnown RBP12.21□□□□□ -0.45
TNRC6A-206ENST00000477487 ARHGEF37A1IGU5 675 aa12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 DNALI1O14645 258 aaPredicted RBP12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 DCLK1O15075 740 aa12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 RARGP13631 454 aa12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 SLCO1A2P46721 670 aa12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 KCNQ1P51787 676 aa12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 PMS2P54278 862 aa12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 BASP1P80723 227 aaKnown RBP12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 PIK3R6Q5UE93 754 aa12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 RWDD4Q6NW29 188 aaKnown RBP12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 CCDC13Q8IYE1 715 aa12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 KLHL23Q8NBE8 558 aa12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 IRGQQ8WZA9 623 aa12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 CDC42EP4Q9H3Q1 356 aaKnown RBP12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 ABCC13Q9NSE7 274 aa12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 SEPT10Q9P0V9 454 aa12.21□□□□□ -0.46
TNRC6A-206ENST00000477487 TEX28O15482 410 aa12.2□□□□□ -0.46
TNRC6A-206ENST00000477487 FGF18O76093 207 aa12.2□□□□□ -0.46
TNRC6A-206ENST00000477487 FGBP02675 491 aa12.2□□□□□ -0.46
TNRC6A-206ENST00000477487 EPHB2P29323 1055 aa12.2□□□□□ -0.46
TNRC6A-206ENST00000477487 RFC2P35250 354 aa12.2□□□□□ -0.46
TNRC6A-206ENST00000477487 ARL4AP40617 200 aa12.2□□□□□ -0.46
TNRC6A-206ENST00000477487 MAGEA11P43364 429 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms