RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 SYNJ2BP-COX16A0A087WUM0 186 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 FAM159BA6NKW6 160 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 VGLL3A8MV65 326 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 ODC1P11926 461 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 MLNP12872 115 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 ALADP13716 330 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 PCSK1P29120 753 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 HCAR3P49019 387 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 INTS6LQ5JSJ4 861 aaKnown RBP11.86□□□□□ -0.51
NUP188-205ENST00000477069 STEAP4Q687X5 459 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 PM20D1Q6GTS8 502 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 TP53INP2Q8IXH6 220 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 NETO2Q8NC67 525 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 GSDMBQ8TAX9 411 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 PLCD4Q9BRC7 762 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 TRIM56Q9BRZ2 755 aaKnown RBP11.86□□□□□ -0.51
NUP188-205ENST00000477069 SLCO1B3Q9NPD5 702 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 TMEM51Q9NW97 253 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 COX16Q9P0S2 106 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 SLC17A7Q9P2U7 560 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 PCDHA11Q9Y5I1 949 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 I3L4J1 428 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 RNF103O00237 685 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 EEF2KO00418 725 aaKnown RBP11.86□□□□□ -0.51
NUP188-205ENST00000477069 OPHN1O60890 802 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 UBOX5O94941 541 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 LTFP02788 710 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 INHBAP08476 426 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 CDK16Q00536 496 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 GRIK3Q13003 919 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 PDK1Q15118 436 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 TTC39BQ5VTQ0 682 aaPredicted RBP11.86□□□□□ -0.51
NUP188-205ENST00000477069 FAM47EQ6ZV65 393 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 CYS1Q717R9 158 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 ZNF598Q86UK7 904 aaKnown RBP11.86□□□□□ -0.51
NUP188-205ENST00000477069 ECHDC2Q86YB7 292 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 FITM2Q8N6M3 262 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 COLGALT1Q8NBJ5 622 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 ADAM32Q8TC27 787 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 IRGQQ8WZA9 623 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 ZNF75CPQ92670 426 aaPredicted RBP11.86□□□□□ -0.51
NUP188-205ENST00000477069 OXNAD1Q96HP4 312 aaPredicted RBP11.86□□□□□ -0.51
NUP188-205ENST00000477069 KLF6Q99612 283 aaPredicted RBP11.86□□□□□ -0.51
NUP188-205ENST00000477069 TMLHEQ9NVH6 421 aa11.86□□□□□ -0.51
NUP188-205ENST00000477069 PLXNA3P51805 1871 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 GOLGA8RI6L899 631 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 CREB3O43889 395 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 POMCP01189 267 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 MT-ND3P03897 115 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 CSH1P0DML2 217 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 CSH2P0DML3 217 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 CCNFP41002 786 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 CCDC15Q0P6D6 951 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 EIF4EBP2Q13542 120 aaPredicted RBP11.85□□□□□ -0.51
NUP188-205ENST00000477069 HHATQ5VTY9 493 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 LRRC8BQ6P9F7 803 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 LRRC6Q86X45 466 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 GORASP1Q9BQQ3 440 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 VPS11Q9H270 941 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 C12orf65Q9H3J6 166 aaKnown RBP11.85□□□□□ -0.51
NUP188-205ENST00000477069 PRDM12Q9H4Q4 367 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 RXFP1Q9HBX9 757 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 SLC40A1Q9NP59 571 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 RRN3Q9NYV6 651 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 MOCS1Q9NZB8 636 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 RAD54BQ9Y620 910 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 FNDC1Q4ZHG4 1894 aaPredicted RBP11.85□□□□□ -0.51
NUP188-205ENST00000477069 TMEM88BA6NKF7 163 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 ALDH1A2O94788 518 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 NCAM1P13591 858 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 BRCC3P46736 316 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 CXCR3P49682 368 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 BNIP1Q12981 228 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 TUSC3Q13454 348 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 TRMT10BQ6PF06 316 aaKnown RBP11.85□□□□□ -0.51
NUP188-205ENST00000477069 ZNF567Q8N184 647 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 PPM1NQ8N819 430 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 OR10T2Q8NGX3 314 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 LRRC8CQ8TDW0 803 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 MKS1Q9NXB0 559 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 IGSF9Q9P2J2 1179 aa11.85□□□□□ -0.51
NUP188-205ENST00000477069 HMX2A2RU54 273 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 PPP1R12AO14974 1030 aaPredicted RBP11.84□□□□□ -0.51
NUP188-205ENST00000477069 UGT1A9O60656 530 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 IGLV3-25P01717 112 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 GBP2P32456 591 aaPredicted RBP11.84□□□□□ -0.51
NUP188-205ENST00000477069 AP1B1Q10567 949 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 CHSY1Q86X52 802 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 NPWQ8N729 165 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 GBP7Q8N8V2 638 aaPredicted RBP11.84□□□□□ -0.51
NUP188-205ENST00000477069 CCDC63Q8NA47 563 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 COLEC11Q9BWP8 271 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 UGT1A7Q9HAW7 530 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 UGT1A10Q9HAW8 530 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 UGT1A8Q9HAW9 530 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 GGT7Q9UJ14 662 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 IKBKGQ9Y6K9 419 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 BRCA2P51587 3418 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 CAPN9O14815 690 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 LPXNO60711 386 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms