RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 SLC39A13Q96H72 371 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 CDK5RAP1Q96SZ6 601 aaKnown RBP18.34■□□□□ 0.53
SREBF1-211ENST00000476994 PIGVQ9NUD9 493 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 LCMT1Q9UIC8 334 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 COL4A3Q01955 1670 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 F5P12259 2224 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 I6L893 689 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-211ENST00000476994 M0QYT0 321 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 MSI1O43347 362 aaKnown RBP18.33■□□□□ 0.52
SREBF1-211ENST00000476994 PALMO75781 387 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 ATP5C1P36542 298 aaKnown RBP18.33■□□□□ 0.52
SREBF1-211ENST00000476994 SLC7A9P82251 487 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 CDO1Q16878 200 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 GPR158Q5T848 1215 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 C1orf228Q6PIY5 440 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 RSRC2Q7L4I2 434 aaKnown RBP18.33■□□□□ 0.52
SREBF1-211ENST00000476994 ZSCAN30Q86W11 494 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 KIAA2013Q8IYS2 634 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 ARL14EPQ8N8R7 260 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-211ENST00000476994 MAB21L3Q8N8X9 362 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 CD101Q93033 1021 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 FCRL2Q96LA5 508 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-211ENST00000476994 ZSWIM3Q96MP5 696 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 PEBP4Q96S96 227 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 CYP2S1Q96SQ9 504 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 IER2Q9BTL4 223 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 KLF16Q9BXK1 252 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-211ENST00000476994 FAM126AQ9BYI3 521 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-211ENST00000476994 TRPV5Q9NQA5 729 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 MARCH2Q9P0N8 246 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 NCDNQ9UBB6 729 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 NDRG2Q9UN36 371 aaKnown RBP18.33■□□□□ 0.52
SREBF1-211ENST00000476994 ALG6Q9Y672 507 aa18.33■□□□□ 0.52
SREBF1-211ENST00000476994 COMTP21964 271 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 FCARP24071 287 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 WEE1P30291 646 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 RDXP35241 583 aaKnown RBP18.32■□□□□ 0.52
SREBF1-211ENST00000476994 PCK1P35558 622 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 CXCR3P49682 368 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 TAS2R40P59535 323 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 SLC25A11Q02978 314 aaKnown RBP18.32■□□□□ 0.52
SREBF1-211ENST00000476994 TRIP4Q15650 581 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-211ENST00000476994 IFI16Q16666 785 aaKnown RBP18.32■□□□□ 0.52
SREBF1-211ENST00000476994 ARHGAP15Q53QZ3 475 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 TADA2BQ86TJ2 420 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 MFSD6LQ8IWD5 586 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 WBP2Q969T9 261 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 MSANTD3Q96H12 275 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 SERPINB11Q96P15 392 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 FAM204AQ9H8W3 233 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 TRPC7Q9HCX4 862 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 ANLNQ9NQW6 1124 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 DDIT4Q9NX09 232 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 ZSCAN32Q9NX65 697 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 ZMYM5Q9UJ78 669 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 RASAL2Q9UJF2 1139 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 DNMT3LQ9UJW3 386 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 TLR6Q9Y2C9 796 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 HBS1LQ9Y450 684 aaKnown RBP18.32■□□□□ 0.52
SREBF1-211ENST00000476994 HYOU1Q9Y4L1 999 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 OTOGLQ3ZCN5 2332 aa18.32■□□□□ 0.52
SREBF1-211ENST00000476994 TRAV19A0A0A6YYK7 116 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 TMEM110-MUSTN1A8MSY1 372 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 GREM1O60565 184 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 HDCP19113 662 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 IL1R2P27930 398 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 MIPP30301 263 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 NRLP54845 237 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 VITQ6UXI7 678 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 NT5DC3Q86UY8 548 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 MAML2Q8IZL2 1156 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-211ENST00000476994 CMTM8Q8IZV2 173 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 GPR161Q8N6U8 529 aaKnown RBP18.31■□□□□ 0.52
SREBF1-211ENST00000476994 RIN3Q8TB24 985 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 FAM3CQ92520 227 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 TRPV4Q9HBA0 871 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 ARHGAP26Q9UNA1 814 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 PIAS3Q9Y6X2 628 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 CHD5Q8TDI0 1954 aa18.31■□□□□ 0.52
SREBF1-211ENST00000476994 SLC12A8A0AV02 714 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 KCNU1A8MYU2 1149 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 FANCGO15287 622 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 PRAMEF12O95522 483 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 F9P00740 461 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 MBL2P11226 248 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-211ENST00000476994 VIPR2P41587 438 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 SLC1A1P43005 524 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 DEUP1Q05D60 604 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 RING1Q06587 406 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 NME3Q13232 169 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 ARTNQ5T4W7 220 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 TXNRD3NBQ6F5E7 133 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 CC2D1AQ6P1N0 951 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-211ENST00000476994 NYAP1Q6ZVC0 841 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 DAAM2Q86T65 1068 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 MIB1Q86YT6 1006 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 GKN1Q9NS71 199 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 ARHGEF38Q9NXL2 777 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 CPQQ9Y646 472 aa18.3■□□□□ 0.52
SREBF1-211ENST00000476994 COL4A2P08572 1712 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms