RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 FGF11Q92914 225 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 CYFIP2Q96F07 1278 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 CNDP2Q96KP4 475 aaKnown RBP11.9□□□□□ -0.5
BRCA1-213ENST00000476777 ELF4Q99607 663 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-213ENST00000476777 ACE2Q9BYF1 805 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-213ENST00000476777 FBRSQ9HAH7 460 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 SGK2Q9HBY8 427 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 CGNQ9P2M7 1197 aaKnown RBP11.9□□□□□ -0.5
BRCA1-213ENST00000476777 TFIP11Q9UBB9 837 aaKnown RBP11.9□□□□□ -0.5
BRCA1-213ENST00000476777 PLA2G4CQ9UP65 541 aa11.9□□□□□ -0.5
BRCA1-213ENST00000476777 A0A1W2PPC4 97 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 STX6O43752 255 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 ASS1P00966 412 aaKnown RBP11.89□□□□□ -0.51
BRCA1-213ENST00000476777 DNTTP04053 509 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 WNT1P04628 370 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 RPN1P04843 607 aaKnown RBP11.89□□□□□ -0.51
BRCA1-213ENST00000476777 DLG4P78352 724 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 CFHR1Q03591 330 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 TLE3Q04726 772 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 PDE4CQ08493 712 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 INCA1Q0VD86 236 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 ZACNQ401N2 412 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 TTC31Q49AM3 519 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-213ENST00000476777 KIAA0895LQ68EN5 471 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 ADIPOR2Q86V24 386 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 ZC3H3Q8IXZ2 948 aaKnown RBP11.89□□□□□ -0.51
BRCA1-213ENST00000476777 TSC1Q92574 1164 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 TAF4BQ92750 862 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 SLC6A18Q96N87 628 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 USP28Q96RU2 1077 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 DUSP16Q9BY84 665 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 PPP4R2Q9NY27 417 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 MARCH2Q9P0N8 246 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 FLNCQ14315 2725 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 AHCTF1Q8WYP5 2266 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 PLXNA2O75051 1894 aa11.89□□□□□ -0.51
BRCA1-213ENST00000476777 SLC12A8A0AV02 714 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 BRINP1O60477 761 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 ITGAVP06756 1048 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 ABCB4P21439 1286 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 AMPD3Q01432 767 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 KNOP1Q1ED39 458 aaKnown RBP11.88□□□□□ -0.51
BRCA1-213ENST00000476777 C8orf34Q49A92 452 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 MPPE1Q53F39 396 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 UNC13DQ70J99 1090 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 CHST9Q7L1S5 443 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 KIAA0907Q7Z7F0 614 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-213ENST00000476777 ERICH1Q86X53 443 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 SPACA3Q8IXA5 215 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 EID2Q8N6I1 236 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 WFIKKN2Q8TEU8 576 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 GOLGA1Q92805 767 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 TMEM176AQ96HP8 235 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 ARID3AQ99856 593 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 C7orf25Q9BPX7 421 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 NT5C1AQ9BXI3 368 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 CUEDC2Q9H467 287 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 EBF2Q9HAK2 575 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 METRNQ9UJH8 293 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 STRIP2Q9ULQ0 834 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 LRRK2Q5S007 2527 aa11.88□□□□□ -0.51
BRCA1-213ENST00000476777 CAPN8A6NHC0 703 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 C10orf142B7Z368 130 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 ERVH48-1M5A8F1 160 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 DLDP09622 509 aaKnown RBP11.87□□□□□ -0.51
BRCA1-213ENST00000476777 TRIM21P19474 475 aaKnown RBP11.87□□□□□ -0.51
BRCA1-213ENST00000476777 GALCP54803 685 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 CXADRP78310 365 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 CCDC173Q0VFZ6 552 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 TRIP4Q15650 581 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-213ENST00000476777 PPP1R26Q5T8A7 1209 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-213ENST00000476777 ZNF776Q68DI1 518 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-213ENST00000476777 NCEH1Q6PIU2 408 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 USP30Q70CQ3 517 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 SV2AQ7L0J3 742 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 RSRC2Q7L4I2 434 aaKnown RBP11.87□□□□□ -0.51
BRCA1-213ENST00000476777 CACTIN-AS1Q8N1I8 211 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.87□□□□□ -0.51
BRCA1-213ENST00000476777 PLD4Q96BZ4 506 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 DHX58Q96C10 678 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 RSPH9Q9H1X1 276 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-213ENST00000476777 PABPC3Q9H361 631 aaKnown RBP11.87□□□□□ -0.51
BRCA1-213ENST00000476777 APOBEC3GQ9HC16 384 aaKnown RBP11.87□□□□□ -0.51
BRCA1-213ENST00000476777 SLC39A2Q9NP94 309 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 PLSCR2Q9NRY7 297 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 ABCB8Q9NUT2 735 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 DMAC2Q9NW81 257 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 SERGEFQ9UGK8 458 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 GGA2Q9UJY4 613 aa11.87□□□□□ -0.51
BRCA1-213ENST00000476777 A0A1W2PR77 199 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 FAM47DPA6NHR8 397 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 WNT9AO14904 365 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 YKT6O15498 198 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 KIF20AO95235 890 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 HLA-DRAP01903 254 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 PABPC1P11940 636 aaKnown RBP11.86□□□□□ -0.51
BRCA1-213ENST00000476777 PDCP20941 246 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 EPHA8P29322 1005 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-213ENST00000476777 CASP1P29466 404 aa11.86□□□□□ -0.51
BRCA1-213ENST00000476777 ACTN2P35609 894 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms